Gene Daci_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0121 
Symbol 
ID5745657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp131868 
End bp132476 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content72% 
IMG OID641295183 
ProductTetR family transcriptional regulator 
Protein accessionYP_001561152 
Protein GI160895570 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCGCC GCCCCCTGCA ATCGCGCGCG CAGGCCACAT CGCAGGCGCT GCAGGACGCC 
TTTGTTCGGC TTGTGATCGA GCAGGGCTAC GAGCGCACCA CGGTGCGCGA GGTGGCCGCC
GTGGCCGGCG TGGGCCTGGG CACCTTCTAT GAATACTTCG GCAACATGGA CACGCTGGCG
GCCATGTGCA TCCACCGCCA GGTGCAGGCC CTGCACGCCC AGGGGCTGCA GACGCTGCAG
GACAGTGCCG GCATGCCGCT GGCCACGCGC GTGGACCGCC TGCTGGACAC CCTGGTCGAC
GGCATTGCGC GCGAGGCGCC GATGTGGGCC GCGCTGTTCA TGCTGGAGCG CAAGGTGTCC
GCGCCCGAGC CCTTCCGCCG CCACTACCAG GCCTATGTAC AGCTGTGGGG CACGGCATTG
CAGGACTGCG ATCCGCCACT GCCCGCGCCG GCCCAGCCCC TGGCACGGCT GCTGCACACG
CTGACCTATG GCTGGGTGTC GCAGTCGCTG CTGGCGCTGG GGCCGCAGCA GACGCTGCAG
CAGCTGCGCG CGCCGCTGGG CTGGGCCATC CATGCGCTGC TGCGCGAGGC GCAGGCTCCG
TCCGCGTAG
 
Protein sequence
MRRRPLQSRA QATSQALQDA FVRLVIEQGY ERTTVREVAA VAGVGLGTFY EYFGNMDTLA 
AMCIHRQVQA LHAQGLQTLQ DSAGMPLATR VDRLLDTLVD GIAREAPMWA ALFMLERKVS
APEPFRRHYQ AYVQLWGTAL QDCDPPLPAP AQPLARLLHT LTYGWVSQSL LALGPQQTLQ
QLRAPLGWAI HALLREAQAP SA