| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0018 |
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| Symbol | |
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| ID | 5745554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 19638 |
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| End bp | 22742 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641295081 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001561050 |
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| Protein GI | 160895468 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTT CCCTGATAGC GTTTGTGGTG CACCGGCGGC TCGTCGCCCT GTGTGCCACC
CTGATCATCG CCATCTATGG CGTGTACTCA TACCTGCACA CGGCCATCGA GGCCTATCCC
GATGTGACCA ATGTGCAGGT CGGCGTGATT GCCCAGGCGC CGGGCCTGGC CCCCGAGGAG
GTGGAGCGCC AGATCACCCA GCCGCTGGAG CGCGAGCTCA ACGGCACGCC GGGCCTGGTG
TCGCTGCGCT CGGAGAGCTA CTTCGGCCTG GCCATGATCA ACCTCGTCTT CAATGACGAT
GCCGACAGTT TCCATGCGCG CGCCGAGGTG TCGCAGCGCC TGCCCCAGGC CAATTTGCCC
GATGGTGTCA CGCCCGAGAT GGCGCCTGAC TACACGCCGC TGGGCAAGAT CTTCTACTAC
CGCTTGAAGA GCGACCGCCA CACGCTGGCG CAGCTGCGCA CCGAGCAGGA ATGGCGCGTG
GTGCGCGTGC TCAAGCAGGT GCAGGGCGTG GCCGACGTGG TCAGCATCGG CGGCTTCGTC
AAGGAGTTCC ACGTCGAGGT GGATCCAGAG AAGCTGTATG CGCTGGGCCT GTCGCTGGAA
GACGTGAGCG ATGCCCTGTC CAAGTCCAAC CGCAACGTGG GCGGCGGCCT GATGCGCCGC
GGCGAGCAGT CGCTGATCAT CCGAGGCATC GGCCTGCTGC GCACGCCGCA GGAGATCCAG
GGCGTGGTGG TGGCCATGCG CGGCAGCGCG CCCGTGACCA TTGGCGACGT GGCGCGCGTG
GTGCAGTCGC ACACGCCGCG CCAGGGCTCG GTGGGCATGG ACGATGCCGA CGACGTGGTC
CAGGGCATCG TGCTGCTCAA GCGCGGCGAG AACCCCTCGG TGGTGCTGGA CCAGATCCAT
GCCAAGGTGG CCGCGCTCAA TGACGGCGGC CTGCCCGAGG GCATGCACAT GGAGACCAAC
TACGACCGCT CCGACCTGGT CGGCCACACG CTGGGCACGG TGCAGCACAA CCTGCTGTTC
GGCGCCACGC TGATCGTGGG CGTGCTGTGG CTGTTCCTGC GCAGCCTGCG CGGCTCGCTG
ATCGTGGCCA CGGTGATCCC GCTGTCGCTG CTGGTGGCCT TCATCGGCCT GCACCTGCTG
GGCATGCCGG CCAACCTGAT CTCCATGGGC GCCATCGACT TCGGCATCAT GGTGGACGGC
GCCGTGGTGC TGGCCGAAAA CATCATCCGC AACGCCCGCA TGCGCAAGCC GCAGACGCAG
GCGGACATGC GCCACATCAT CATCGACTCG GCCGTGGCCG TGGCCAAGCC CACGCTGTTC
GCCATGGCCA TCGTGATCGC GGCGCTGATC CCCGTGTTCT CGCTGGAAAG CATCGAGGGC
CGCATCTTCC GTCCGCTGGC CATGACCTAC AGCTTCGCGC TGCTGGGTGC CCTGGTCTTC
GCCATGGGCC TGGTGCCGGC GCTGTGCGCG CTGTTCCTCA AGCCCCAGCA CGTGATGGTG
GAAGAGCCCA AGATCTTCGA CCGCGCCCAC CACGGCTACC AGCACTGGAT TGCCAAGGTG
CTGGACGCAG GCCGCCGCCG CGCCATGATC GTCATCGCCT CGCTGGCCAT TCTGGTGGCT
GCCGGCGTGT CGGCCGCCTG GCTGGGCACG GAATTCCTGC CCGAACTCGA TGAGGGCGAT
GCCTATGTGC TGGTGCAGAT GCCCGCATCG ATCTCGCTGG AAAAGGGCCA GGAAGTGCTG
CGCGACGTGC GCCTGCGCCT GAAGACCTTC CCCGAGGTGA TCACCGTCAC CACCGAGCAG
GGCCGGCCCG AGTCCGGCAC CGACAACGAG ACGCTGAATC TGGCCAAGGT GCTGGTGCGC
CTGAAGGGCC ACGGCGAATG GCGCAAGGGC CTGACCAAGC CCCAGCTCAT CGAGCAGATG
CGCGCCACGC TGAGTGAGAT TCCGGGCGTG TCGTTCAACT TCGCCCAGCC CATCCGCGAC
AGCGTGGAGG AATCGACGTC CGGCGCGCGC GGCCAGGTGG TGCTCAAGGT CTTCGGCCCC
GACATTCCGC AGCTGCGCTC CATCCTGCAG CAGACCGTGG ACCTGGTGAA GGACATCGAC
GGCGTGGTCG ATCTGGGCCT GTACCGCGAT GCGCCTGCAC CCCAGGTCCA CGTGGAGTTC
GACCGCCAGT CGCTGGCGCG CCAGGGCATT GCCATGGAGA CCGCGCAAAA GACGCTGGAG
GCGGCACTGG CCGGCAACAT CTCCACCACG CTGTGGGAGG GCGAGTACCC CGTGCCCGTG
CGCGTGCGCC TGCCCTATGT GGACCGCATG GACGAGGAGC GCATCCGCAA CATCGCCATC
CCCCTGCCCA ACGGCGGCTC GGTGCCGCTG CATTCGGTGG GCCAGGTCGC CATCAAGATC
GGCAACTCCT CCATCTTCCG CGAAGGCAAT GCGCGCTACA TGGCGCTCAA GTTCAACGTG
GAAGGCCGCG ACATCGGCTC CGTGGTCAAG GACACGCTGG CCACGTTCAA GAAGAACGTG
AAGATCCCCG AGGGCTACCA GGCCGTCTGG GGCGGCGAGT GGGAGAACCA GCAGCGCGCC
GCTGCACGCC TGAAGATCGT GGTGCCGCTG TCGCTGATCA TCGTCTACGC CCTGCTGTTC
GGCGCGCTGG GCCAGGCGCG CAGCGCGGGC ATCATCTTGC TGTGCGCGCC CTTCACCATG
GTGGGCGGCA TCGCGGCCCT GCACTTTGCG GGCATCGAGC TGTCCATCAG CGCGGCCATC
GGCTTCATCG CGCTGCTGGG ACAGGTGGCG CTGGCCGGCC TGCTGGTGAT CTCGGCCGTG
GAGGAGCTGC GACGGCAGGG CATGCCCATG ATGCAGGCCC TGGTTGAGGG CGCTGCCGAG
CGCATGCGCT CCATCGTGCT CGTGGCGCTG CTGGCGCTGC TGGGCCTGCT GCCCATGGCG
CTGTCCACGG GCGTGGGCAG CGAGACGCAA AAGCCCTTCG CCTCCGTGAT CGTGGGCGGC
ATGGTGGTGC TGCCCCTGGT GGCCCTGGTG CTGCTGCCCG TGCTCTATGC GCTGCTGGGC
CCCAAGAACA TGTTGACGCA GGAAGAACTC GATGAAAAAG AGTGA
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| Protein sequence | MLRSLIAFVV HRRLVALCAT LIIAIYGVYS YLHTAIEAYP DVTNVQVGVI AQAPGLAPEE
VERQITQPLE RELNGTPGLV SLRSESYFGL AMINLVFNDD ADSFHARAEV SQRLPQANLP
DGVTPEMAPD YTPLGKIFYY RLKSDRHTLA QLRTEQEWRV VRVLKQVQGV ADVVSIGGFV
KEFHVEVDPE KLYALGLSLE DVSDALSKSN RNVGGGLMRR GEQSLIIRGI GLLRTPQEIQ
GVVVAMRGSA PVTIGDVARV VQSHTPRQGS VGMDDADDVV QGIVLLKRGE NPSVVLDQIH
AKVAALNDGG LPEGMHMETN YDRSDLVGHT LGTVQHNLLF GATLIVGVLW LFLRSLRGSL
IVATVIPLSL LVAFIGLHLL GMPANLISMG AIDFGIMVDG AVVLAENIIR NARMRKPQTQ
ADMRHIIIDS AVAVAKPTLF AMAIVIAALI PVFSLESIEG RIFRPLAMTY SFALLGALVF
AMGLVPALCA LFLKPQHVMV EEPKIFDRAH HGYQHWIAKV LDAGRRRAMI VIASLAILVA
AGVSAAWLGT EFLPELDEGD AYVLVQMPAS ISLEKGQEVL RDVRLRLKTF PEVITVTTEQ
GRPESGTDNE TLNLAKVLVR LKGHGEWRKG LTKPQLIEQM RATLSEIPGV SFNFAQPIRD
SVEESTSGAR GQVVLKVFGP DIPQLRSILQ QTVDLVKDID GVVDLGLYRD APAPQVHVEF
DRQSLARQGI AMETAQKTLE AALAGNISTT LWEGEYPVPV RVRLPYVDRM DEERIRNIAI
PLPNGGSVPL HSVGQVAIKI GNSSIFREGN ARYMALKFNV EGRDIGSVVK DTLATFKKNV
KIPEGYQAVW GGEWENQQRA AARLKIVVPL SLIIVYALLF GALGQARSAG IILLCAPFTM
VGGIAALHFA GIELSISAAI GFIALLGQVA LAGLLVISAV EELRRQGMPM MQALVEGAAE
RMRSIVLVAL LALLGLLPMA LSTGVGSETQ KPFASVIVGG MVVLPLVALV LLPVLYALLG
PKNMLTQEEL DEKE
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