Gene Cphy_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3924 
Symbol 
ID5744700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp4820802 
End bp4821464 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID641295040 
Producthypothetical protein 
Protein accessionYP_001561010 
Protein GI160882042 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0405964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGGC GCTATTATGT AGATGAAGAA AGCAATGAAG AGTTACTTCG TATTATAAGA 
AATTTAGATC GACGTCTTCA GGGGGAGGGC ATGCAGATAC CTGACTCAAA CGATGAGGGT 
ACACACGTTC CAAGAAAGTT TAAAACTGGT GAAATTTATC CAACCAACAC TGCTCCGATT 
ATTGCGAGAA AAGAAGGAAA CATCCTGCCT TATGCAATGA CTTGGGGATA TAAAGGTTTC 
GAGGGAAATA AAGTAATTAT TAATGCACGT TGCGAAAGTG CATCAGAAAA AAGAATGTTT 
GCAAGCGATC TGGATTCTAG ACGTATTGTA GTTCCTGCAA GTGGCTTTTA TGAATGGGAG 
CATAGTGGTA CCAAAACCAA ATATTATTTT ACCTCCAAGC AAGAAAAACC CCTTTATATG 
GCTGGCTTAT CTCATCCCGA TGAAGAGGAA GATCGCTTTG TTATTCTCAC AACATCAGCA 
AATGAATCTA TGAAAGACAT TCATAATCGT ATGCCTGTCT TATTAAAAGA AGATGAAATT 
GAAGGTTGGC TATCCTCCAG AGAAGAAGCA GTTTCTATCA TGAAACGCAT ACCAGAACAA 
TTGCATAGGA CTAACACTTC CCCAAAAGAA CCACAATTTG AACAACTTAG ATTTCCATGG 
TAA
 
Protein sequence
MCGRYYVDEE SNEELLRIIR NLDRRLQGEG MQIPDSNDEG THVPRKFKTG EIYPTNTAPI 
IARKEGNILP YAMTWGYKGF EGNKVIINAR CESASEKRMF ASDLDSRRIV VPASGFYEWE 
HSGTKTKYYF TSKQEKPLYM AGLSHPDEEE DRFVILTTSA NESMKDIHNR MPVLLKEDEI 
EGWLSSREEA VSIMKRIPEQ LHRTNTSPKE PQFEQLRFPW