| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3877 |
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| Symbol | |
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| ID | 5744830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4762911 |
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| End bp | 4765193 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641294990 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_001560963 |
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| Protein GI | 160881995 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00336349 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAA TATATAATAT TGAGGGCATG ACCTGTGCTT CTTGTAGTAG TGCAGTGGAA
CGGGTAACCG GTAGGCTTCC AGGAGTTAGC TCTAGTAGCG TGAACTTAAC AACAGCGAAA
CTTACAATTG AATATGAAGA AGATAAGGTA ACACCGGACC TAATTATGGA GAAGGTGAAA
AAGGCAGGGT TTGGTATTTC CCCATACCAT AAGGAAAAAC AAATAGATGA GAAAGCTGTC
CGTCAAAAAG AAGAGGAGGA GACTGAGAAG AAATTTAAAG CTTCAAGAAC CAGACTCGTG
ATTGCAATCG CATTTGCAAT TCCTCTACTT TATATCAGTA TGGGCCATAT GGTACCTTGG
AAGATGCCAT TACCAGCATT TCTAGACATG CATCATATGC CATTTAACTT TGCTGTTGCA
CAATTGTTAT TAACAATTCC GGTGTTAATC TGTGGAAGTA AATTTTATAC GAACGGATTC
CATACATTAT TTAAAGGAAA TCCGAATATG GATACTTTAG TTGCTGTTGG TACATCAGCC
GCTTTTATCT ATAGTGTAGT GATGACAATT CGCATCCCTT ATAATTCCAA TGCTGTTGAC
AATTTATATT ATGAATCCGC AGCAGTTGTT GTTACGTTAG TTATGCTTGG CAAGTATTTA
GAGAGCAGAA GTAAGAGAAA GACCACACAA GCGATTCGTA AGATGATGGA GTTAGCACCG
GATACTGCCG TTTTAGTGGA AAATGGAGTG GAAAGAGAAG TTCCGGTAAG TGAACTAAGA
AAAAATGATA TCGTTATTAT TAAGGCTGGC AGTAAGGTAC CTATTGATGG TGTTGTTATC
GAGGGAAGCA GTAGTGTAGA TGAATCCATG CTTACTGGTG AAAGTATTCC TGTGGAAAAG
CAAGTTGAAG ATATGGTGAT TGGTGGAAGC CAGAACTTTA ATGGTATGCT TTTAGTACGT
GTTACAAGCG TTGGTGAAGA TACTACACTT GCTAAAATTG TAAAACTGAT GGAAGATGCC
CAAGGGAAGA AAGCACCGAT TTCCAAGATT GCGGATAAAG TCGCAGGATA TTTTGTTCCT
GTCGTAATGA TTATTGCAGT TGTTGCTGCA GTTATTTGGT TTTTACTTGG TCATGACATT
GCTTTCGTAT TAACAATATT TGTATCTGTT TTAGTAATTG CTTGTCCATG TGCGCTAGGG
CTTGCAACAC CGACTGCAAT CATGGTTGGA ACTGGCCTCG GTGCAAGTCA TGGTATCTTA
ATTAAGAGTG GGGAAGCCCT AGAAACTGCC CATCATATTG ATACCGTGGT ATTAGATAAA
ACAGGAACAA TTACAGAGGG AAAACCGAAG GTTGTTGAAA TATTTACAAA GAATTATAGT
AGAGAACAAA TACTAAGTTT TACAGCTGCT GTTGAGGCAG GAAGTGAACA TCCTCTTGCA
CGTGCAATCG TAGAGGAGTA TCATAGTAGT GTGAAAGAAA AAGAACCTGC AATAGAACAG
TTTGAGAATA AGACTGGTCT TGGAGTAGAA GCAATTCTTT CAGAGAGTGG CAAAAAGATT
GCTGTAGGTA ATGAAAAGCT TATGCTAAGC TATGGGAAAG ATGCTGTGTC TAAGGAATTT
CACATGGCAG CTGAACAGAT GGCAATGCAA GGTCAAACTC CAATCTATGT AATGATAGAG
GGCAAACTGG AAGGAATTAT CGGAGTAGCA GATACAATTA AGTCCACCAG TAGAGAAGCA
GTGGAAGCGC TTAAATCATT AGGTTTAACA GTATATATGC TAACCGGAGA CCACAAAGTT
ACTGCTGAAG CAATTGCAAA AAAGGCTATG GTGGATCATA TCATCGCGGA GGTATTACCA
GGCGATAAGG CAGAAGTTGT TAAGAAGCTT CAATCTGAAG GCAAGAAGGT TATGATGGTA
GGAGATGGTA TCAATGATGC TCCTGCACTA ATTCAGGCAG ATGTTGGTGT TGCTATCGGA
AGCGGCAGTG ATATTGCAAT TGATTCTGCA GATCTTGTAT TAATGCGTTC TGATCTTATG
GATGTTTACC GTGCGGTACA TTTAAGTAAG TTAACAATCC GTAACATCAA ACAAAATCTT
TTCTGGGCCT TTATTTACAA TATTATTGGT ATTCCAATTG CCGCAGGATT ACTGTATCCA
TTTACAGATA TATTATTAAG TCCAATGCTT GGAGGATTTG CAATGTCTTT AAGTTCTGTT
TGTGTAGTTA CAAATGCATT AAGCTTACGA TACAAACGAC TTGAGGTAAA AAGGAGGGCA
TAA
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| Protein sequence | MKEIYNIEGM TCASCSSAVE RVTGRLPGVS SSSVNLTTAK LTIEYEEDKV TPDLIMEKVK
KAGFGISPYH KEKQIDEKAV RQKEEEETEK KFKASRTRLV IAIAFAIPLL YISMGHMVPW
KMPLPAFLDM HHMPFNFAVA QLLLTIPVLI CGSKFYTNGF HTLFKGNPNM DTLVAVGTSA
AFIYSVVMTI RIPYNSNAVD NLYYESAAVV VTLVMLGKYL ESRSKRKTTQ AIRKMMELAP
DTAVLVENGV EREVPVSELR KNDIVIIKAG SKVPIDGVVI EGSSSVDESM LTGESIPVEK
QVEDMVIGGS QNFNGMLLVR VTSVGEDTTL AKIVKLMEDA QGKKAPISKI ADKVAGYFVP
VVMIIAVVAA VIWFLLGHDI AFVLTIFVSV LVIACPCALG LATPTAIMVG TGLGASHGIL
IKSGEALETA HHIDTVVLDK TGTITEGKPK VVEIFTKNYS REQILSFTAA VEAGSEHPLA
RAIVEEYHSS VKEKEPAIEQ FENKTGLGVE AILSESGKKI AVGNEKLMLS YGKDAVSKEF
HMAAEQMAMQ GQTPIYVMIE GKLEGIIGVA DTIKSTSREA VEALKSLGLT VYMLTGDHKV
TAEAIAKKAM VDHIIAEVLP GDKAEVVKKL QSEGKKVMMV GDGINDAPAL IQADVGVAIG
SGSDIAIDSA DLVLMRSDLM DVYRAVHLSK LTIRNIKQNL FWAFIYNIIG IPIAAGLLYP
FTDILLSPML GGFAMSLSSV CVVTNALSLR YKRLEVKRRA
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