| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3872 |
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| Symbol | |
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| ID | 5744825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4757925 |
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| End bp | 4758614 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641294985 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001560958 |
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| Protein GI | 160881990 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0547348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAAGA TATTAATAGT AGAAGATGAA GCTGCAATTG CAGAACTTGA AAAGGATTAT
TTAGAGCTTT CTGGTTTTGA GGTAGATATT GAAAATACCG GAGATAAAGG TTTAGCGGCA
GCTCTAACAG GGGATTATAA GTTAATCATT CTAGACTTAA TGTTACCAAA CGTAGATGGA
TTCGAAATTT GTAAGCGTGT TAGGGAAGAA AAGAATATCC CTGTTATTAT GGTGTCTGCA
AAAAAGGATG ACATTGATAA GATTCGAGGA CTTGGACTCG GAGCAGATGA TTATATGACA
AAGCCATTTA GCCCAAGTGA ATTGGTGGCT AGGGTAAAAG CACATTTAGC AAGATATGAG
CGATTGATTG GTACTGGAAT GAAGGAAAAT GAAATGATAG AAATTCGTGG TATCAAAATT
GATAAAACTG CTCGACGTGT TTATGTGAAT GGAGAGGAAA GGGCATTTAC AACCAAAGAG
TTTGACCTAC TTACTTTCTT AGCACAAAAT CCAAACCATG TTTATACTAA GGAAGAACTA
TTTCAAGAGA TTTGGGATAT GGAGTCGATT GGTGATATTG CTACGGTTAC CGTTCATATT
AAAAAGATCC GAGAAAAGAT TGAAGCAAAC ACTTCAAAAC CACAATACAT CGAAACAATC
TGGGGTGTGG GCTACCGCTT TAAAGTTTGA
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| Protein sequence | MDKILIVEDE AAIAELEKDY LELSGFEVDI ENTGDKGLAA ALTGDYKLII LDLMLPNVDG
FEICKRVREE KNIPVIMVSA KKDDIDKIRG LGLGADDYMT KPFSPSELVA RVKAHLARYE
RLIGTGMKEN EMIEIRGIKI DKTARRVYVN GEERAFTTKE FDLLTFLAQN PNHVYTKEEL
FQEIWDMESI GDIATVTVHI KKIREKIEAN TSKPQYIETI WGVGYRFKV
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