| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3857 |
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| Symbol | |
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| ID | 5744809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 4730021 |
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| End bp | 4731766 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641294969 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_001560943 |
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| Protein GI | 160881975 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000136608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAC ATTTTAAGTC AAACAATGAA GTTTCCCTAA AATGGAGTAT GATGCGTACT
CTAATCTTAT GTTGGGTATT ACCGCTTACA ATACTAACAA TTATCGTATT TGACTTTGTT
TATCATAACT TAAATCAACA GACAGAGCAA ACGATTATAA ATTCCACAGA TAAAGCGGTC
GAAATTTGCC TTTCAAGGAT GCAAGATTCT ATTACAGCAT CGAAAAATGC TTCTTATCTT
CCAACTATAA GGGAAAAATA TAATCTATAT CTTCTTGATA ATAATAGGCA ACAGCTTTAC
ACTAAGGTAA CCGAATTCCT AATACAGCAA TACAAATTCG ATGACCGTTT TCTCAGTACT
ATGTTAATGT TTACAGAAGA TCCGCAAGAA GTTTATTGTA CATATAGCAA CAAATATAAA
TCTACATATT CCAATGTCCA GTATTTCAAA CGTAATGTTT TAACTCAGGT TATGGAAATC
TCGAAAGATT TGGATACTAA GGTGAAGTTC CTTCCAATTG ATAATCGTGT TTACATGGTG
AGAAATCTTA TGACACCAAC TTTTGAGCCA TATGCTGTAA TTGTAATGGA ACTAAACAAT
GAGTCTATCT TTGAAAGTAT CGGAACCATC TGGGGATACG AAACAGGTAC TATCTATAAA
AATGGAAGCT TTTTATGGGG CTCCAAAGAA AATGAATATT TATCCCGCTA TGATAAAGTT
ACCAATCGAA GTATCTACTA TAAAAATAAA GGAGATTCTT ATGTATATAA AACATTAAAG
TACAATCAAG ATGTCCTGAC TTTTGTAGCA AAACTAGATA GCGCTGTTAT ACTCTATGAG
ATGGATGCAT TAAAATATAT TGTTACTTTT TCGATTCCTT TACTAATTGC ATTCGCATTC
ATTGTATTTC GGTTCTTCCA TCGAAAGATA ACAAAACCGA TATTCCAACT AATCTCAGCA
TCTCATAAAA TTGAAGACGG AGATTATGGA ACTCAAATTC AAATAATACA AGGTAGCCAG
GAATTTTCTT TCCTTAGCGA AGCATTTAAC TCAATGTCCC TAAAACTTAA GCATCAGTTT
GAGCAAATTT TCCTGGAAGA GCTAGCCCTA AAGGATGCTA GAATCATGGC ACTACAATCA
CAAATTAATC CTCACTTTTT AAACAATACC TTAGAGATCA TAAACTGGGA AGCAAGACTG
ATGGAAAATT ATAAAGTGAG TGGTATGATT GAAGCTTTGT CTACCATTCT AGGTGCGACA
ATGAATCGAA GACAACAACA GCATATCCCG CTTGCAGAAG AACTTTCCTA TGCAGATGCT
TACTTCTTTA TCATTTCTAC AAGGCTTGGA GAACGGTTTC AAGTTGTTAA GGAAATTGAT
GAAAGTTTAT TACAAGTTCC AGTACCTAGG CTTATTATCC AGCCAATTAT AGAAAATGCA
GTCGAACATG GGATGAATGC ACAAAATCAA GGCGTAGTTA CGCTTCATAT TTTTTCCGAA
GAGGATAAGT TATTTATTGA GGTACGAAAT CAAGGAGAAT TAACAGCGAT AGACAAAGAG
AGAATAGATG CCTTATTAAG CGACGATTTT GATGTAGAAA ATGAGCGTTC CACGAGCCTT
GGTATTCGTA ATGTTAACCG ACGTCTAAAA ATCATTTACG GATACGATTG TGGATTATCC
ATCAAAAGTG ACAAAGACGG TTCTACAGTA AGTACAATTA TAGTCAAATT AAACAAAACA
AACTAA
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| Protein sequence | MKVHFKSNNE VSLKWSMMRT LILCWVLPLT ILTIIVFDFV YHNLNQQTEQ TIINSTDKAV
EICLSRMQDS ITASKNASYL PTIREKYNLY LLDNNRQQLY TKVTEFLIQQ YKFDDRFLST
MLMFTEDPQE VYCTYSNKYK STYSNVQYFK RNVLTQVMEI SKDLDTKVKF LPIDNRVYMV
RNLMTPTFEP YAVIVMELNN ESIFESIGTI WGYETGTIYK NGSFLWGSKE NEYLSRYDKV
TNRSIYYKNK GDSYVYKTLK YNQDVLTFVA KLDSAVILYE MDALKYIVTF SIPLLIAFAF
IVFRFFHRKI TKPIFQLISA SHKIEDGDYG TQIQIIQGSQ EFSFLSEAFN SMSLKLKHQF
EQIFLEELAL KDARIMALQS QINPHFLNNT LEIINWEARL MENYKVSGMI EALSTILGAT
MNRRQQQHIP LAEELSYADA YFFIISTRLG ERFQVVKEID ESLLQVPVPR LIIQPIIENA
VEHGMNAQNQ GVVTLHIFSE EDKLFIEVRN QGELTAIDKE RIDALLSDDF DVENERSTSL
GIRNVNRRLK IIYGYDCGLS IKSDKDGSTV STIIVKLNKT N
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