Gene Cphy_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3816 
Symbol 
ID5744768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4669320 
End bp4669862 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content40% 
IMG OID641294928 
Productrubrerythrin 
Protein accessionYP_001560902 
Protein GI160881934 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000477508 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TTGTATGTAA TGTATGTGGT TATGTTCATG AAGGAGATTC TGCTCCTGAA 
GTTTGTCCAA TCTGTAAGGC TGGTGCTGAT AAGTTTACTG AACAGTCTAG CGATCTTACA
TGGGCAGCTG AGCACGTAGT TGGTGTTGCT CAGGGTGTTA GCGAAGATAT TCTTAAGGAT
TTAAGAGATA ACTTTACTGG TGAGTGTGCT GAAGTAGGTA TGTACCTTGC AATGGCAAGA
GTAGCTCATA GAGAAGGCTA CCCAGAAATC GGTTTATACT ATGAGAAGGC AGCTCATGAA
GAAGCTGATC ATGCTTCCAG ATTTGCAGAA TTACTTGGTG AAGTAGTAAC TAACAGCACA
AAGAAGAACT TAGAGTTAAG AGTAGCTGCT GAAAATGGTG CTACAGCTGG TAAGTTTGAT
CTTGCTAAGC GTGCAAAAGA AGCTAATCTT GATGCAATTC ATGACACTGT ACATGAGATG
GCTAAAGATG AAGCTAGACA TGGTAAGGCA TTCTTAGGCT TACTACAGAG ATATTTTCAA
TAA
 
Protein sequence
MKKFVCNVCG YVHEGDSAPE VCPICKAGAD KFTEQSSDLT WAAEHVVGVA QGVSEDILKD 
LRDNFTGECA EVGMYLAMAR VAHREGYPEI GLYYEKAAHE EADHASRFAE LLGEVVTNST
KKNLELRVAA ENGATAGKFD LAKRAKEANL DAIHDTVHEM AKDEARHGKA FLGLLQRYFQ