Gene Cphy_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3779 
Symbol 
ID5744731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4631756 
End bp4632532 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content40% 
IMG OID641294891 
Producthypothetical protein 
Protein accessionYP_001560865 
Protein GI160881897 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000120477 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTTT CTACGGGATT GCAATATCGT CAGGCAGCCC TTGCGGGAAT GGCGACCCAG 
TTTGTATGGG GAGCTATGGA GATTTTATTA TTTAAAGCGT TTTATGAGGC GGATCCGTCA
GCGTTTCCGA TGGAGTTTTC AGCACTTACT TCTTACATCT GGCTACAGCA GGCATTTTTA
GCGCTTTATA TGATGTGGTT TTTAGAGCGG GAAATCTTCG ACTCGATTAC GAGTGGAGGC
ATTGCATATG AATTATGCCG ACCGCTTGAT TTATACTCGA TGTGGTTTGC AAGAAATATT
GCAAACCGTT TATCAAAGGC AGTACTTCGA TGTATTCCTA TATTAATTCT TGCAGCTTGT
TTACCAAAAC CATATGGCAT GCTGCCGCCA AGAAGTTTTA TTACATTTAT ATTATTTTTA
ATTTCTATGG GCCTTGCGTT GTTTGTTACA GTGGCGTTTA GTATGATTTT ATACATCCTA
TGTTTTTATA CGATTTCCCC ACTTGGAATA CGTATGGTTG CGTTTTCTTT GGTGGAATTC
TTCTCAGGAT CAGTCATTCC ACTACCTTTT TTACCAGATG GAATAAGACA GGTGTGTGAA
ATGCTGCCAT TTGCTTCGAT GCAAAACGTA CCGTTTCGAA TTTATAGTGG TGACCTTTCT
GGAATAGATG GATATGGTGC GGTCTCATTA CAGCTTTTCT GGGTAGTTGC TTTGATTATT
TTAGGTAAAT GGTTATTGAA AAAAGCACAG ATCAGAGTTG TTGTACAAGG AGGTTAG
 
Protein sequence
MRFSTGLQYR QAALAGMATQ FVWGAMEILL FKAFYEADPS AFPMEFSALT SYIWLQQAFL 
ALYMMWFLER EIFDSITSGG IAYELCRPLD LYSMWFARNI ANRLSKAVLR CIPILILAAC
LPKPYGMLPP RSFITFILFL ISMGLALFVT VAFSMILYIL CFYTISPLGI RMVAFSLVEF
FSGSVIPLPF LPDGIRQVCE MLPFASMQNV PFRIYSGDLS GIDGYGAVSL QLFWVVALII
LGKWLLKKAQ IRVVVQGG