Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3778 |
Symbol | |
ID | 5744730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4630973 |
End bp | 4631749 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641294890 |
Product | hypothetical protein |
Protein accession | YP_001560864 |
Protein GI | 160881896 |
COG category | [R] General function prediction only |
COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000127963 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAT ATAAAAAATA TTTTGGAATT CATTTTCGTA GTGCGATGCA GTATAAAGTA TCGTTTTTAT TAACAACGAT TGGTCAGTTT TTAGTATCAT TTAATATATT TTTAGGAATA TATTTTCTGT TTGCGAGATT TTCATCGGTA AAAGGATATA CTTATCAAGA GGTCATGCTT TGTTTTGCTG TAAATATTAT GGCTTATTCT TTAGCAGAGA TGTTTGCAAG AGGCTTCGAT ATGTTTCCTT CTATCATAAG CAATGGAGAA TTTGACCGTA TTTTAGTTCG ACCGAAAGGG ATTCTTTTAC AAGTTTTGTG CAGTAAAATA GAATTTACGA GAATAGGTCG TATGATTCAG GCTGTCATAA TGTTTTTTTA TGGCGTTAAA ACAAGCGGGA TTACATGGAG TATTGATAAG GTAATTACAG TAGGCTTTAT GGTAATTGGT GGAACTACAC TTTATAGCGC GCTATTTCTT TTGTATGCAG CGGTAAGTTT TTTTACGATA GAAGGAATTG AAGTAATGAA TATTGTAACG GATGGTGCAA GAGAATATGG CAAATACCCA TTTGATACGT ATGGAAAAAC AGTATTAAAA ATAGTTACGT ATCTTATTCC ATTTGCACTA TTTCAGTATT ATCCTTTTCT CTATTTATTA GGTAGAAACA CGAATCCAGT TCTTATCATT CTGCCTCTTG CTTCTGCATT TTTTTATCTA CCTTGTTATC TTTTTTTTCA AATTGGATTA AAACATTATA AATCGACAGG ATCTTAA
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Protein sequence | MKLYKKYFGI HFRSAMQYKV SFLLTTIGQF LVSFNIFLGI YFLFARFSSV KGYTYQEVML CFAVNIMAYS LAEMFARGFD MFPSIISNGE FDRILVRPKG ILLQVLCSKI EFTRIGRMIQ AVIMFFYGVK TSGITWSIDK VITVGFMVIG GTTLYSALFL LYAAVSFFTI EGIEVMNIVT DGAREYGKYP FDTYGKTVLK IVTYLIPFAL FQYYPFLYLL GRNTNPVLII LPLASAFFYL PCYLFFQIGL KHYKSTGS
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