Gene Cphy_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3771 
Symbol 
ID5744723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4625208 
End bp4626509 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content38% 
IMG OID641294883 
Productantifreeze protein type I 
Protein accessionYP_001560857 
Protein GI160881889 
COG category[S] Function unknown 
COG ID[COG4260] Putative virion core protein (lumpy skin disease virus) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000603754 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCG TTGAAGTAGT TAAATATGAT GGAGCACCGA ATGTGTTTGC ATGGAAGTAT 
CCAAATAATG AATTAGGAAC CTGGACGCAA TTAATTGTAA ATGAATCGCA GGAAGCTGTT
CTGTTTAAAG GTGGTAAGGC ATTAGATGTT TTCGGAGGTG GAAGGCATAC ACTAGAAACT
GCAAATATAC CTTTATTAAA TAATATTATT AATCTCCCCT TCGGACGAAG GTCTCCTTTT
AGTGCTGAAG TATGGTATGT AAATAAGGTT TACTCTTTGA ACATTAAATG GGGTACAACA
TCTCCAATAC AGATACAGGA TCCTAAATAT GGGATTTTTA TACCGGTTCG TTCCTATGGG
CAATTTGGTA TCCGTATAGA AGATTCTAAG AAGTTCTTGA TAAAATTAGT GGGAACATTA
AATGTGTTTG ACGATAATAA CATTTTGCAG TATTTTAGAG GACTGTATCT GACAATGGCG
AAAGATACCA TTTCTTCCTA TCTCATTCAG AAGAAGATAA GTGTATTGGA AATCAATGCA
TATCTTGATG AAATGTCAAA TTATATAGTA GAGCGGATCA AGCCGACTAT GGATGAGTAC
GGTATTGGTT TAACAAATTT CTATGTAAAT GATATTAATG TACCAGAGGA GGATACAGCA
GTAAAGAAGC TAAAGGATGC TTTGGCCAAG CGCGCTGAAA TGAATATTAT AGGTTATGAT
TATCAACAGC AGCGTTCCTT CGATACGTTA GAGAGTGCAG CAAGTAACCA AGGTGGAGTT
TCATCCGGTA TTATGGGTGC CGGGATGGGA TTAGGAATGG GGATCAATGT GGGAAATGCA
ATCGGTACCC AGTTTGGCTC TGTTTCAAAT GCATTGAATA CAAAAGGTGG TAATAAGAAG
GAGTGTGTAA AGTGCCATGC GGCGATTGAG GCAGGTACTC GTTTTTGCCC TTCTTGTGGG
AATGATACTA GTAAAACGGA ATCTGAGAAT AGTAATACGA TAAAATGTGA TAATTGTGGG
GCGTTTTATT CCGCAAATAC GAAATTCTGT CCGGAATGCG GAAATAGATA CAACCCATGT
CCTAACTGTA AAGCAGATAT ACCGGATGGT GCAACCAATT GCTCTTCCTG CGGATACGAA
TTACCGATTC CTTGTCCGGG ATGCGGTAAT CTTGTTCATA GTAAAAAGCA TAAATTCTGC
CCAGAATGTG GTACTCCTTT AGTAAAGAAA TGTCCAAAAT GTGAAACTGT AATTGAAGGC
AGCCCTAAAT TCTGTCCGGA ATGTGGAGAA AAACTAAGTT AA
 
Protein sequence
MAIVEVVKYD GAPNVFAWKY PNNELGTWTQ LIVNESQEAV LFKGGKALDV FGGGRHTLET 
ANIPLLNNII NLPFGRRSPF SAEVWYVNKV YSLNIKWGTT SPIQIQDPKY GIFIPVRSYG
QFGIRIEDSK KFLIKLVGTL NVFDDNNILQ YFRGLYLTMA KDTISSYLIQ KKISVLEINA
YLDEMSNYIV ERIKPTMDEY GIGLTNFYVN DINVPEEDTA VKKLKDALAK RAEMNIIGYD
YQQQRSFDTL ESAASNQGGV SSGIMGAGMG LGMGINVGNA IGTQFGSVSN ALNTKGGNKK
ECVKCHAAIE AGTRFCPSCG NDTSKTESEN SNTIKCDNCG AFYSANTKFC PECGNRYNPC
PNCKADIPDG ATNCSSCGYE LPIPCPGCGN LVHSKKHKFC PECGTPLVKK CPKCETVIEG
SPKFCPECGE KLS