Gene Cphy_3638 details

Gene Information

• Locus tag: Cphy_3638
• Symbol: rplQ
• ID: 5742662
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 4489162
• End bp: 4489698
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641294748
• Product: 50S ribosomal protein L17
• Protein accession: YP_001560724
• Protein GI: 160881756
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0203] Ribosomal protein L17
• TIGRFAM ID: [TIGR00059] ribosomal protein L17

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000734422
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGGCT ACAGAAAACT TGGAAGAACT TCAAGTCAGA GAAAAGCATT GTTAAGAAAT 
CAAGTAACCA ATCTCTTATA CAATGGCAAG ATTGTAACTA CCGAGGCAAA AGCGAAAGAA 
ATTCGTAGAA TTGCTGAAGG TATGATTGCT CTTGCTGTTA AAGAGAAGGA TAACTTTGAA 
ACTGTTACAG TAACTGCTAA GGTTGCTCGT AAAGATAAAG ATGGTAAGAG AGTGAAGGAA 
GTTGTGAATG GTAAGAAAGT AGACGTTTAT GATAGCGTTG AAAAGACTAT TCAGAAGGAT 
AAGGCATCCA GACTTCACGC TAGAAGAAAG ATGTTAGCTT ACCTTTACCC TGTAACTGAA 
GTTCCAGCAG AAGCTGCAGG AAAGAAGAAA AACACAAAGG AAGTTGACTT AACTGAAAAG 
TTATTCAACG AAATCGCTCC TAAGTATGTT AGCCGTAATG GTGGTTACAC AAGAATCATC 
AAAATCGGTC AGCGTAAGGG CGATGCTGCT ATGGAAGTTT TAATTGAGCT TGTTTAA 

 

Protein sequence

MAGYRKLGRT SSQRKALLRN QVTNLLYNGK IVTTEAKAKE IRRIAEGMIA LAVKEKDNFE 
TVTVTAKVAR KDKDGKRVKE VVNGKKVDVY DSVEKTIQKD KASRLHARRK MLAYLYPVTE 
VPAEAAGKKK NTKEVDLTEK LFNEIAPKYV SRNGGYTRII KIGQRKGDAA MEVLIELV