Gene Cphy_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3623 
Symbol 
ID5742647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4474929 
End bp4475753 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content36% 
IMG OID641294733 
ProductMerR family transcriptional regulator 
Protein accessionYP_001560709 
Protein GI160881741 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0243323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGA ATAATATGAA CAAAAATAAT ATAAAATCCT TTACCACCGG AGAATTTGCT 
AAGAGATTTG GGATCAAAAA AGATACTCTC TTCTATTATG ATCGGATTGG TTTATTTCAT
CCAGCCAAGG TAGGGGATAA CGACTATCGG TATTACACAT TTGAACAACT TGATGTCTTC
TGGATGCTTC AATCTTTAAG AGAGCTTAAC TTTCCAATTA AATCATTAAA AAACTATGTA
AATGATCCCT CCCCGCAAAA ATTAATTGAT CTTTCGAAGG AACAGCTAAC CCAAGTAAAA
GAAGAAATAA AAAAGCTAGA GCAGATACAG TGGTTATTAA GTAATATCGT AGACTATACC
GAGGAGGCAC TTAGTGCACC TTTAGATGAA TTCATTGTAA AAACCCTTCC TGATGAAACT
ATCCTATACA GCAATCCACT TCCTTTAAGA GAAGAGCTGA ATACTGATGA GTGGTTTAAC
TTAACGGATC AGTTTTTAAA AGAGGCAGAA CTAAAAGGCC CTGCTTACGC AGGTTCTATC
ATAAACCAAA AGGATATTGA ATCTGGAATT TATGGGAGAG TTGGCCGGCT TTTTGTCCGA
AGGAATGACG CGAAATCTAA AATAAAGCCA GCAGGACTTT ATGCAATAAC TTACCACAAA
GGGCCATTTG AATTGCCGAA GGAACTTTAT GAGCCATTTC TGCAAAAGAT TAAAGAACAG
GGATTAACGA TATGCGGTGA CGCGTACGAA GAATATCTTT TAGATAAGTT GGCAGTTCAA
GACACCGATG ATTTTATGAT AAAAATTAGT ATTGCGGTTT ACTGA
 
Protein sequence
MDENNMNKNN IKSFTTGEFA KRFGIKKDTL FYYDRIGLFH PAKVGDNDYR YYTFEQLDVF 
WMLQSLRELN FPIKSLKNYV NDPSPQKLID LSKEQLTQVK EEIKKLEQIQ WLLSNIVDYT
EEALSAPLDE FIVKTLPDET ILYSNPLPLR EELNTDEWFN LTDQFLKEAE LKGPAYAGSI
INQKDIESGI YGRVGRLFVR RNDAKSKIKP AGLYAITYHK GPFELPKELY EPFLQKIKEQ
GLTICGDAYE EYLLDKLAVQ DTDDFMIKIS IAVY