| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3588 |
|---|
| Symbol | |
|---|
| ID | 5742613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4432750 |
|---|
| End bp | 4433562 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641294700 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001560676 |
|---|
| Protein GI | 160881708 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.143888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTAAAG CTAAAATTAG ATATTTCTTT GCCTATGCTT TTTTAATCCT TGTTTCGTTT
ATTTCTGTAT TTCCGCTGCT TTGGATGTTA ATCTCAGCGA CCAATACAAG TCTTGATGTC
ATACGTGGAA AGATGAGCTT TGGTACTGCT TTAGTGGATA ATTTTAAACA GCTTGTTCAA
ACAACCCAAA TTGGTCAGGC ACTTATAAAT TCGTTTCGTA ATGCCTTCGT TCTCACTATT
ATGAGTTTAC TTGTGTGTTC TCTTGCAGGA TATGCTTTTG AAATTTATCA CGACAAATGG
AAAGACGGCG TTATGAAGCT CTTACTACTT TCTATGATGG TACCATTTGC AGCAACTATG
ATACCGTTAT TTACCTGGTT TGGTAAGATG AATCTAATCA ACACGACAGC AGGGTTTATG
TTACCATCCA TATCAACAGC ATTTCTTATC TTTTTATTCC GTCAAAGTTC CAGAAGTTTT
CCTTATGAAA TTGTGGAAGC TGCTAGACTT GAGGGTATGT CAGAGATACG AATCTTTACC
AGAATTTTTG TCCCAATTAT GAAGCCTACT TATGCAGCAG CAATTACCGT TACCTTTATG
AACGCTTGGA ATAGTTATTT ATGGCCACTG GTTATCTTAC AAGATAAGAA AAGTCAGACC
ATGCCTATCT TAATATCAAA TTTAATTTCA GGCTATACCA TTAATTATGG TGTATTAATG
TTAGCGGTGT CGATTAGTAC TTTACCTACT ATACTTATTT TCTTTGTACT ACAGAAGAAT
TTTACGGAAG GCATTACCGG AGCTGTGAAA TAA
|
|---|
| Protein sequence | MTKAKIRYFF AYAFLILVSF ISVFPLLWML ISATNTSLDV IRGKMSFGTA LVDNFKQLVQ
TTQIGQALIN SFRNAFVLTI MSLLVCSLAG YAFEIYHDKW KDGVMKLLLL SMMVPFAATM
IPLFTWFGKM NLINTTAGFM LPSISTAFLI FLFRQSSRSF PYEIVEAARL EGMSEIRIFT
RIFVPIMKPT YAAAITVTFM NAWNSYLWPL VILQDKKSQT MPILISNLIS GYTINYGVLM
LAVSISTLPT ILIFFVLQKN FTEGITGAVK
|
|---|
| |