Gene Cphy_3557 details

Gene Information

• Locus tag: Cphy_3557
• Symbol: greA
• ID: 5742961
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 4390777
• End bp: 4391259
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641294668
• Product: transcription elongation factor GreA
• Protein accession: YP_001560645
• Protein GI: 160881677
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000103558
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAGA AGAAGAATAT TTTGACCTAT GAAGGGCTGA AACAATTAGA GGATGAGTTA 
CAAGATTTAA AAGTAAACAA AAGAAAAGAA GTTTCTCAGA AGATTAAAGA GGCCAGAGAA 
CAAGGTGATT TGTCAGAGAA TGCAGAATAC GACGCAGCGA AAGACGAGCA AAGAGATATA 
GAGGCAAGAA TCGAAGAAAT CGATAAGATT TTAAAGAATG CCGAAGTTGT CGTAGAAGAT 
GAGGTTGACG TTGACACCGT AAACATTGGC TGTCTAGTTA GAATTTTAGA TATGGAATTT 
AACGATGAAT TAGAATATAA AATTGTAGGT TCTACCGAAG CGAATAGCTT AAAGGGAAAA 
ATCTCAAATG AGTCACCAGT AGGTAAAGCA TTAATTGGCG CAAGAAAAGA TGATGTGATT 
GAAATCGAGA TCAATGGCAA CAGCTTTAAA TATAAAGTTC TTGAGATTCA AAAATCAAAT 
TAA 

 

Protein sequence

MAEKKNILTY EGLKQLEDEL QDLKVNKRKE VSQKIKEARE QGDLSENAEY DAAKDEQRDI 
EARIEEIDKI LKNAEVVVED EVDVDTVNIG CLVRILDMEF NDELEYKIVG STEANSLKGK 
ISNESPVGKA LIGARKDDVI EIEINGNSFK YKVLEIQKSN