| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3488 |
|---|
| Symbol | |
|---|
| ID | 5743600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4301714 |
|---|
| End bp | 4302838 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641294600 |
|---|
| Product | sporulation integral membrane protein YtvI |
|---|
| Protein accession | YP_001560578 |
|---|
| Protein GI | 160881610 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | [TIGR02872] sporulation integral membrane protein YtvI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000381599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAAAA ATTGGGTCAT TTATATTAAA ATAATTGTAA ACCTATTATT AACAATACTG
TTAGGAGTAC TCCTACTGTT TGTTGGACCA AAGTTATTAG CGTTCTTTCT TCCGTTTGTA
GTCGCTTATA TTCTATCACT AATTGCTAAT CCACTTGTTA AGTTTATGGA AAAAAGAATA
AAGATAGCAA GAAAGCATGG TTCTGCCATT ATCATTATAC TAGTATTGGC TCTAATATTT
GGCTTGCTCT ATTTGGTTTT ATCAATACTA TTTCGTGAGA TCTATAGTCT AATTACTGAT
TTACCAAATA TTGCACAGCA AATCGCCGAA TCCATAGAGG GTATTTCTAC TAAGTTTGCA
AGCTTGTATG AAGCACTTCC ACAAGGCTTG AAGACGTTCT TAGATAATCT AAATACTAGT
GCACAAGGAT CGTTAGACAA GCTATTAAGC GGTGTGGATT TAACCAGCGT CATAAAGGCT
GGCGGGGTTG TCTCGACTTT TACCAATACG GTATTTATGA TGATAATTAC AATATTGGCT
ACTTACTTTT TTATTGTGGA CCGCGATAAG ATAATTGCAG CTGCGAACAA GATTTTACCG
GAATCTATAA AACGATTTAA CCGTATCATT AGTGATAATT TTAAAACAGC AGTTGGGGGC
TATTTTAAAG CCCAGTTTAA AATTATGATT ATACTTACGG TGGTAATGTT TATAACATTT
GAGTTTATGG GAATAAACTA TTCAATTTTA CTAGCACTTA CTATAGCAGT CATCGACTTT
TTGCCGGTAC TTGGAACAGG ACTAGTATTC TGGCCATGGG CAGTAATTTC ATTTATAAAT
GAAAATTATG TAGAGGCCAT AGTTATATTA GTACTATATC TTGCTTGCCA AATCATTAAG
CAGGTATTGC AACCTAAAAT GGTAGGAGAT AGCATTGGAA TCAATCCTTT TCAGACCCTC
CTCTTTATGT TTATTGGATA TAAACTATAT GGAATTGGCG GTATGATATT TGGAATTCCA
ATAGGAATGG TACTAGTTAG TCTTTATCGA CTTGGAATGT TTGAACGAAT TACACGCGGT
ATTAAAATAA TAGTTTCTGG TATTAACGAT TTCAGAAAAT ACTAA
|
|---|
| Protein sequence | MQKNWVIYIK IIVNLLLTIL LGVLLLFVGP KLLAFFLPFV VAYILSLIAN PLVKFMEKRI
KIARKHGSAI IIILVLALIF GLLYLVLSIL FREIYSLITD LPNIAQQIAE SIEGISTKFA
SLYEALPQGL KTFLDNLNTS AQGSLDKLLS GVDLTSVIKA GGVVSTFTNT VFMMIITILA
TYFFIVDRDK IIAAANKILP ESIKRFNRII SDNFKTAVGG YFKAQFKIMI ILTVVMFITF
EFMGINYSIL LALTIAVIDF LPVLGTGLVF WPWAVISFIN ENYVEAIVIL VLYLACQIIK
QVLQPKMVGD SIGINPFQTL LFMFIGYKLY GIGGMIFGIP IGMVLVSLYR LGMFERITRG
IKIIVSGIND FRKY
|
|---|
| |