Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3484 |
Symbol | |
ID | 5743596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 4296587 |
End bp | 4298413 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641294596 |
Product | GTP-binding protein TypA |
Protein accession | YP_001560574 |
Protein GI | 160881606 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000244002 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACGA AACGTGAAAA TGTAAGAAAT ATCGCAATTA TTGCCCATGT CGATCATGGT AAAACTACGC TCGTAGACGA GCTTCTAAAA CAGAGCGGTG TATTCCGTAG CAATCAAGTT GTAGAAGATC GTGTTATGGA CTCCGGTGAC ATAGAAAAAG AACGTGGTAT TACTATCCTA GCGAAAAACA CGGCTGTTAC TTATAAAGAT ACAAAAATTA ATATCATTGA TACTCCTGGC CATGCGGACT TTGGTGGCGA GGTAGAACGT GTTCTTAAGA TGGTAAATGG TGTTGTACTT GTAGTCGACG CCTTTGAAGG TGCCATGCCA CAAACGAAAT TCGTTCTTAA AAAGGCATTA GAACTTAGCT TACCAGTTAT CGTGTGTATT AATAAAATTG ACCGCCCAGA AGCTAGACCA ACCGAAGTTA TTGATGAAGT GTTAGAACTC TTCATTGACC TAGATGCTAG CGAAGAACAG CTTGACTGTC CATTTATCTT CGCTTCTGCA AAATCAGGAA TCGCAATTCT TGAATTAGAT CATACTCCAA AGAATATGGA GCCACTTTTT GAGACTATCC TTGAATACAT CCCTGCCCCA GAAGGTGATC CAGATGCAGG TACTCAAGTA CTCATTAGTA CCATCGACTA TAACGAATAC GTAGGTCGTA TTGGTGTAGG TAAAGTTGAT AATGGCGTAC TCCGTGTAAA TCAAGATGTT GTTATTGTAA ATGAGCATGA TCCAGACAAG TTTAAAAAGG TTAAAATAAA TAAGCTTTAT GAATTTGAAG GTTTGAAAAA GGTAGAAGTA AACGAAGCAA CTGTAGGTTC TATCGTTGCT GTCTCCGGTA TCTCAGACAT TCATATTGGA GATACCATCT GTTCTACTGA CAATGTGAAC CCAATCCCTT TCCAAAAGAT TTCTGAGCCA ACCATTGCAA TGCACTTTAT CGTAAATGAT AGCCCTCTTG CTGGACAAGA AGGTAAGTTT GTAACATCAA GACACTTAAG AGAACGTCTC TTCCGTGAAT TAAATACTGA CGTCAGCCTT CGTGTAGAAG AAACCGATAC CACAGAAAGC TATAAAGTAT CTGGCCGTGG TGAGCTTCAC TTATCCGTAT TAATTGAGAA CATGCGCCGT GAAGGCTTTG AGTTTGCTGT TAGTAAAGCT GAAGTATTAT ATCGTCATGA TGAAGCTGGT AAAAAGCTTG AGCCAATGGA AAGAGCATAC CTTGACGTTC CAGAAGAATT CTCCGGTACA GTTATCGAAA AATTAAGCCA GAGAAAAGGT GAACTCATTG GTATGTCATC TGCAAACGGT GGATACACTC GTCTAGAGTT TTCTATCCCT GCAAGAGGCT TAATTGGATA CCGTGGAGAG TTCATGACCG ATACGAAGGG AAATGGTATC ATCAACACAT CATTTGACGG TTACGGCCCT TATAAGGGAG ATATCCAGTA TCGTAAACAA GGTAGCTTGA TTGCTTTTGA ATCTGGTGAA GCGATTACTT ATGGTTTATT CAATGCACAA GAGCGTGGTT CCTTATTCAT CGGACCAGGC GAGAAGGTAT ATTCCGGAAT GGTAATTGGA CAGAACGGTA AAGCTGAAGA TATCGAGATT AATGTATGTA AGAGAAAACA GCTTAGTAAC ACTCGTTCCT CCAGTGCAGA TGAGGCACTC CGCCTTACAA CACCTAGAGT ATTAAGCTTA GAGCAAGCGT TAGAATTTAT CGATACCGAT GAGTTATTAG AGGTTACTCC AAAGAGCTTA AGAATTAGAA AGAAGATTCT TGATCCTACG ATGAGAAAGA GAGCAAGTAG AAATTAA
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Protein sequence | MNTKRENVRN IAIIAHVDHG KTTLVDELLK QSGVFRSNQV VEDRVMDSGD IEKERGITIL AKNTAVTYKD TKINIIDTPG HADFGGEVER VLKMVNGVVL VVDAFEGAMP QTKFVLKKAL ELSLPVIVCI NKIDRPEARP TEVIDEVLEL FIDLDASEEQ LDCPFIFASA KSGIAILELD HTPKNMEPLF ETILEYIPAP EGDPDAGTQV LISTIDYNEY VGRIGVGKVD NGVLRVNQDV VIVNEHDPDK FKKVKINKLY EFEGLKKVEV NEATVGSIVA VSGISDIHIG DTICSTDNVN PIPFQKISEP TIAMHFIVND SPLAGQEGKF VTSRHLRERL FRELNTDVSL RVEETDTTES YKVSGRGELH LSVLIENMRR EGFEFAVSKA EVLYRHDEAG KKLEPMERAY LDVPEEFSGT VIEKLSQRKG ELIGMSSANG GYTRLEFSIP ARGLIGYRGE FMTDTKGNGI INTSFDGYGP YKGDIQYRKQ GSLIAFESGE AITYGLFNAQ ERGSLFIGPG EKVYSGMVIG QNGKAEDIEI NVCKRKQLSN TRSSSADEAL RLTTPRVLSL EQALEFIDTD ELLEVTPKSL RIRKKILDPT MRKRASRN
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