Gene Cphy_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3482 
Symbol 
ID5743594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4293665 
End bp4294549 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content37% 
IMG OID641294594 
Productdihydrodipicolinate synthase 
Protein accessionYP_001560572 
Protein GI160881604 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000010244 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTT TTACTGGTGC TGGTGTGGCT ATTGTTACAC CATTTAAGGA AAACAGAGAG 
GTTAATTACG AAAAGCTAGG TGAACTTATT GATTTTCAAA TTAACAATGG AACTGATAGT
ATAATAATAT GTGGTACAAC AGGAGAATCA TCTACCTTGA CACATGAAGA ACATATCGAG
TGTATTCGTT TTGCAATTGA ATACACAAAG AAAAGAGTAC CAGTGATTGC TGGAACTGGA
TCAAATTGTA CAGAAACAGC GATATACTTA TCAAAGGAAG CACAGGTTGC AGGTGCAGAT
GCAGTACTTT TAGTAACTCC TTATTATAAT AAGGCAACTC AAAAAGGATT AATCGAGCAT
TTTACTGCGA TTGCTAAGTC TATTGATCTA CCTGTTATGT TATATAATGT TCCTTCAAGA
ACGGGTTGCA ATATCCTACC AGGGACGGCT GCTACTTTAG TTAATACGGT AGATAATATT
GTTGCTATGA AGGAAGCTTC GAGTAATATC GCTCAGGTTG CAGAACTTGC GCATACATGT
GAAGGAAAGT TAGATATTTA TTCTGGATGT GATGATTCTA TTGTACCAGT AATGTCCTTA
GGAGGACTTG GAGTTGTTTC TGTATTATCT AATATTGCAC CTAGACAAAC ACATGATATT
GTGGCAAAAT TTCTTGAAGG GGATACGAAA GGCAGCTTAG ATCTTCAGTT AGAGTATTTA
CCAGTAATCA ATGCATTATT TAGCGAGGTA AATCCGATAC CGGTGAAGAA AGCGCTTAAT
CTTATGGGCT TTGAAGTGGG TCCTTTAAGA AGTCCATTAA CCGAGATGGA AGATGCTCAT
GCAAAGATTC TTGCTGATGA AATGAAAAAA GTTGGTTTAA TATAA
 
Protein sequence
MAIFTGAGVA IVTPFKENRE VNYEKLGELI DFQINNGTDS IIICGTTGES STLTHEEHIE 
CIRFAIEYTK KRVPVIAGTG SNCTETAIYL SKEAQVAGAD AVLLVTPYYN KATQKGLIEH
FTAIAKSIDL PVMLYNVPSR TGCNILPGTA ATLVNTVDNI VAMKEASSNI AQVAELAHTC
EGKLDIYSGC DDSIVPVMSL GGLGVVSVLS NIAPRQTHDI VAKFLEGDTK GSLDLQLEYL
PVINALFSEV NPIPVKKALN LMGFEVGPLR SPLTEMEDAH AKILADEMKK VGLI