| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3424 |
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| Symbol | |
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| ID | 5743535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4206896 |
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| End bp | 4210411 |
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| Gene Length | 3516 bp |
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| Protein Length | 1171 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641294536 |
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| Product | ATP-dependent nuclease subunit B |
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| Protein accession | YP_001560516 |
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| Protein GI | 160881548 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
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| TIGRFAM ID | [TIGR02773] ATP-dependent nuclease subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTA ATAAAAGGCA TGACATGTTT TCGCATGAGG TACCAAATAA AAAATTGAAA
GGGGGAGAAA GAATGTCACT ACAATTTGTC ATAGGGGGTT CCGGTGCAGG AAAGTCCTAT
CAACTATATC AAAGAGTAAT AGAGAGTTCG CTAAAGGAGC CAAAAGGGAA ATTTCTAATT
CTAGTTCCAG AACAATTTAC GCTCCAAACT CAAAAAGACT TGGTAACGAT GCACCCCAAG
AAGGGCATTC ATAACATCGA TATTCTTAGC TTCCTTCGTT TAGCGTTTCG CATTTTTGAG
GAGACTGGCG GGAACGATCG TTTAGTTCTT GAAGATACTG GGAAAAGTAT GATTGTTAAG
AAAGTAATGA TGGAGAAGAG AAACGACCTG ATTTTATTTG GTGCTAATGT TAAAAAGCAG
GGATTTGTAG AAGAGATGAA ATCCATTATC TCAGAATTAG CCCAGTATAG CATTCATACG
GATGAACTGC AAAAGATGAA GGAAGTAGCC AAAGGAAAGC CACTTCTTAA TCATAAATTA
ACGGATATCA TGACAATTTA TCAAGCCTAT GAGGAATTCC TCCAGGATAA ATATATCAAC
TCAGAGGAAA TCTTAGATCT TCTTTGTGAT GTTATTGATG ATTCTTCTTT TGTAAATGAC
AGTGAAATAT GTTTGGATGG ATTTACAGGA TTTACACCAT CGCAATATAA ATTGCTATCG
CACTTAATGA AAAAGGCGAA GTCAGTTACT GTAACAATAA CAATGGATGA AAGTCAAATT
AATCGAAAAC AGGAGGAACA TCAATTATTC TATCTTAGCG GTAAGATGGC GGAAAAGCTT
ACAGACCTTG CAATAACGCA AAAGATAGAG ATAAAACCTC CAATTCTTGT TGCATCAGAA
AATGGTGGAT ACTCTTATCG TTTTCATAAT AGCATGGCAC TTTCTGCATT GGAAAAAAAC
ATCTTCCGAT ATCCATATAA ATCATTTACT GAGGAGCAAG ATGACATATC AATTACAGCA
GCAAAAGACC CAATGGCCGA GGCACGTCAT GCAGTGATAG AAATTACAAG GTTACTTAGG
GAAGAAGAAT ATCGTTATAA AGATATCGCT ATTGTTTCTG GTGCGATGGA GGTTTATGGT
GATATTGTGA AAAGAGAGTT GGAGCTCGCA GGCATTCCTT GTTTTGTGGA TCATAAGAAG
AATATCCTTA CAAACCCAGT GGTGGAATTT TTGCGTTCTG CACTTGATGT AGTGACTCAT
AATTTTGATT ATGAAGCAAT ATTTCGTTTC TTAAAGTGCG GATTAACGGA TTTTACGATG
GATGAGATAG ACCTTTTTGA AAACTATGTG ATAGCGTTTG GTATTCGAGG AAAATACCGT
TATGAGCATG AGTGGGAGAG AAAATATAAA ACCAATTATG AAGTGGATCT AGAGAAAATC
AATTATGTTA GAGAGTGTAT TTTGAAAGAG TTTACACCGC TTTATGAAAC TTTAACAAGT
AAAAAGTCCT CGGTAAGGGA ATGTGTAAAC GCTCTTTATA ACTTATTGTG TACTTATCAT
ATTGAAGAAA AGATTCATAT ATTTGTTGAA AAGTTTAAGG CGCAAGGGGA GAAAGAAGAT
AAACTAAGAG CCAAAGAATA TGAGCAAATC TATCGAATGG TTCTTGAAAT ATTTGACCGA
ATGGTAGAAC TACTTGGGGA GGATGTATTA CCGTTAAAGG AATTTAGAGA TATTCTTGAT
ACGGGTTTTC GCGAAGCGAA AGTTGGTTTG ATTCCTCCAA GTATTGATCA GATTCTAGTT
GGTGATATCG AACGTACCAG GCTAAAAGAT ATCAAAGCAT TATTTTTCTT AGGAGTGAAT
GATGGAATCG TACCGAAAGC AAATCCTGGT GGTGGAATAT TATCCGATGC AGAGCGGCAG
TTATTTGCGG ATCACGAAAT CGAATTATCT CCAACGAAAC GCCAGACCGC TTATCTTACA
GAGTTTTATC TCTACCTTAA TTTAACAAAG CCACAGAATA AGTTATATCT TTATTATAGC
AAATTAGATG TTTCGGGAAA GTCGATTCGT GCTTCTTATT TGCTTGGAAA GATAAGTAAA
ATATTTCCAA AGCTTAAGAT TTATGATGCA GATAGAAAAT CGAGGGAAGA TGAGTTACTT
GGTACGGATC AAGGATTAAG CTATCTAATC TCTGTACTTC GAGATTATGA GGGGGAACAA
CCTAAACTTT GGAGAGAAGT ATATCATTTA TATGTGAGTG GTCAAATCAA AGGTAGGATA
TCATTAGACA AGGTATTACA AGGGGTATTT TATCAAAACT ACGAACAGGG TTTAACCAAA
GAAGTGGCAA GAAAGCTTTA TGGGGAAACA TTACTTGGCA GTGTAACCCG TATGGAAAAA
TATGCGGCAT GTGCTTTTGC ACATTTTCTT CAGTATGGTC TAAGTCTAGA AGAACGTCAG
GAATATAAGA TTTCCATGCC TGACATTGGG AGCTTGTTTC ATGAGGCATT GGAACGGTTT
TCGAAAGCTT TAAAAGAGTT AGATATTTCA TGGCATGAGC TTCCGGAGGA CGTTCGTATT
TCTCTTGGAG AGCGCTGCGT AAGAGAAGCA GTAGAGAATT TTGGAAATGG AATTTTAGAA
AGTTCGAAAC GAAGTGCCTA TTTAGCAACC AGAGTTGAGA GGATATTGCA AAGGACAACG
AAAACTTTAA CGCATCAGTT GCAACAGGGA GTATTTGAAC CTGGAAGCTA TGAGCAATAT
TTTTCTCATG CGGATCGATA TCTAAACTTA CGAGGACGAA TTGACCGTGT GGATTTATAT
GAACAGGACG GTAAACTTTA TGTTAAAGTT ATTGACTATA AATCAGGTAG TACATCCTTC
GACTTAATGA ATTTATACTA TGGTTTGCAA TTGCAGTTAG GTGTTTACTT AAGTGCTGCT
ATGGAATTAA TGAAAGAGCA GTATCCAAAT CATGAGATAC ATCCAGCTGG AGTATTTTAT
TATAATTTAG ATGATCCCAT TGTTACAAAA TCTAGCTCCG TAGAGGAGGA TATTGAGAAG
AAGTTAGCGA TGAACGGACT TGTGAATGCA TCTAAGGTTG TAGTGCCGCT TCTTGATACT
AGCTTTTGTG GAGATGAGGG AGAACTTGCG CCCTCGACAA AATCAACAGT AATCCCGGTA
GAGACTGGGA AGGATGGAAC TTTTACAAAG AGATCTTCCG TAGCAAAAGA AGAAGAACTT
ATTACATTGA CGGACTATAT CAAAGATCTG ATGCATCGTT TCAGTGAGCA AATCATGGAG
GGAAAAGTCA GGCATAATCC TTATAGGGCC AAGAATCGAA ATGCCTGTAC TTATTGTTCC
TTCCAATCTG TTTGTGGATT TGACTGTAAA GTGAGTGGTT TTTCGTATCG TAATTTAAAG
ACATTAAATA AAGAGGAAGT TTGGAATTTA ATCAAAAAGG AGGATGAGTT TTTTGGCAAA
GACGAGTTGG ACACCGGGGC AACAGAAGGT AATTGA
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| Protein sequence | MSFNKRHDMF SHEVPNKKLK GGERMSLQFV IGGSGAGKSY QLYQRVIESS LKEPKGKFLI
LVPEQFTLQT QKDLVTMHPK KGIHNIDILS FLRLAFRIFE ETGGNDRLVL EDTGKSMIVK
KVMMEKRNDL ILFGANVKKQ GFVEEMKSII SELAQYSIHT DELQKMKEVA KGKPLLNHKL
TDIMTIYQAY EEFLQDKYIN SEEILDLLCD VIDDSSFVND SEICLDGFTG FTPSQYKLLS
HLMKKAKSVT VTITMDESQI NRKQEEHQLF YLSGKMAEKL TDLAITQKIE IKPPILVASE
NGGYSYRFHN SMALSALEKN IFRYPYKSFT EEQDDISITA AKDPMAEARH AVIEITRLLR
EEEYRYKDIA IVSGAMEVYG DIVKRELELA GIPCFVDHKK NILTNPVVEF LRSALDVVTH
NFDYEAIFRF LKCGLTDFTM DEIDLFENYV IAFGIRGKYR YEHEWERKYK TNYEVDLEKI
NYVRECILKE FTPLYETLTS KKSSVRECVN ALYNLLCTYH IEEKIHIFVE KFKAQGEKED
KLRAKEYEQI YRMVLEIFDR MVELLGEDVL PLKEFRDILD TGFREAKVGL IPPSIDQILV
GDIERTRLKD IKALFFLGVN DGIVPKANPG GGILSDAERQ LFADHEIELS PTKRQTAYLT
EFYLYLNLTK PQNKLYLYYS KLDVSGKSIR ASYLLGKISK IFPKLKIYDA DRKSREDELL
GTDQGLSYLI SVLRDYEGEQ PKLWREVYHL YVSGQIKGRI SLDKVLQGVF YQNYEQGLTK
EVARKLYGET LLGSVTRMEK YAACAFAHFL QYGLSLEERQ EYKISMPDIG SLFHEALERF
SKALKELDIS WHELPEDVRI SLGERCVREA VENFGNGILE SSKRSAYLAT RVERILQRTT
KTLTHQLQQG VFEPGSYEQY FSHADRYLNL RGRIDRVDLY EQDGKLYVKV IDYKSGSTSF
DLMNLYYGLQ LQLGVYLSAA MELMKEQYPN HEIHPAGVFY YNLDDPIVTK SSSVEEDIEK
KLAMNGLVNA SKVVVPLLDT SFCGDEGELA PSTKSTVIPV ETGKDGTFTK RSSVAKEEEL
ITLTDYIKDL MHRFSEQIME GKVRHNPYRA KNRNACTYCS FQSVCGFDCK VSGFSYRNLK
TLNKEEVWNL IKKEDEFFGK DELDTGATEG N
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