| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3336 |
|---|
| Symbol | |
|---|
| ID | 5741616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4061107 |
|---|
| End bp | 4063470 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641294437 |
|---|
| Product | alpha-tubulin suppressor and related RCC1 domain-containing protein |
|---|
| Protein accession | YP_001560428 |
|---|
| Protein GI | 160881460 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0329371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG AGTCAAAACA GTATGGAGAA CTTAATGAAA ATGATTTAAA AATTAATATG
AAAGCAGTAT ATGAAGGAAT GAAATACCAA TCGAAATCAA AGCAAGAGTT GTTAGCACGG
ATTCAACAAA TAGAACTAAG AAAAAATGAC ACTAGTTCAG AAGAAACGCA TGACTATGTC
TATTTGAACT TAAGAAATCA AAAGAAAATA GAAGGAAGAG GAGTATCTTT CTTAAAGCTA
GGAGCACGTA TTTTGACGAT AGCAGCAGTT ATATTCTTTG TTAGTGTCTT GATTTATAAT
GTTCATATTC GATTAGAGAA ACAAAAAGAA GCAGCGGTAG ATTTAAATGA GGTAGATCAA
ATAAATAAAG AAAATAAAGA ACAAAACGAA AATAAAGAAC AAAACGAAAA TAAACAAGGA
GAACATAACT CACAGAATTC AGACAGTGAA CAAAGCCATG AGAATCAGCA AAACAAAGAG
AGTAATCAAA TTAATGAAGA GTACGGGAAA GATAATTTAT TCGGGAATGA AAGAGAAGTT
CCTGTCAGAG TTTCTATGGA AGAACTTCAT CTTACAGGAG AGTTTAGGCT ATCGGATTGT
TATCTTACCA ATGTAGTGCA ACCAGAGAAT CAATATATTA TAGATAAAGA AGGAATACTA
TGGGGACTAG GTGATAATCG TGCAGGACAG CTTGGTCAGA GTGTGCAAGG TTATTTCGGT
GAGGCATATG TTGATTATAC CAAGGAACCA GTGAAAATAG CAGAGAATGT TGTCCATGTA
GATGCTAGCA GAAATTATTT TGCTGTATAT CTAACGGAAG ATGGCAGTCT CTATGGAATG
GGGGCTAATT TTGATGGACT TATGGGAATA AAACAGGTAG GCTCGTATTT TAATCATTCT
ATCGATGTCT GTGCAATTCG TCCTGTTTTG TTAATGAAGG ACGTTGCTTA TGCTAGATGT
GGTGAATATC ATATCCTAGT ACTTAAAAAA GACGGAACTG TATGGAAAAT TGGAGATACC
AAGGATGATA GTCAAAAACC AGATTCGATG GGAACAATAG ATTGGTATGA AAACACCCCG
ATTTCGGAAC CAAAGAAGAT GTTAGAAGAT GCAATCTATA TTTCCACAGA TAGCTTTCAA
TGCGCAGCAA TCCGCTCGGA TGGAACTTTA TGGACTTGGG GAGATAACAG AAAAGGAGTC
TTAGGTACTG GAAATTATGA AGAAGGTACT GTAGAAACCC CTCAACAGAT CGCTACTGAT
GTAAATATGG TATGGCTCGG TGAAGTAGCA TTTAATTCTA CAGTTACGAA GATAACTTAT
GGAATGAGAC AAAGTGAAGC AAGGCTTCCT ATTCCTCAAA TGATTATTCA AAAGAAAGAT
GGTACCTTTT GGGGTTGTGG GGTAGGGTTT GGTGAGTACG AGAAAATAGT TAGTGGAGAG
AAAATTAAAC TATCAGCAGA CTTAGTGCCA GTAGGGTTAA CCAGCAAAGA TAGTCAAATC
ATGAATCATG AACTTAGAGA TTTTCCTTTA GGGACTTCAT ATTTCGAGGT GATTCAGTAT
CTAAAGAAAA AGCAAATCTC TTATCAAGCA TTTGAAGTTA GTAATGAAAT TGAGATTAGT
CATAATTACT TTGGAAATCA ATATGCTTGT AGTGTGCTTG AATTTTCGGA TAGTGGTAAG
CTAGAAACTA TTGAAATTGG TTTTGGTTTC TCACCAGAGG GCAAGATTCG GGTTCAGAGT
TCTGTAGAAG AGGTTCAAAG TATCTATGGG GAAGAGGATA TAAGCCTTTA CAAAAACAAT
GGAAGTATTA TAAAAGAGTA TGTCTATGCA AATGGATATC TACAGATATC GAGTAGAGAT
GGTGCTGTTA CTAATATTAA GATTAGTAAA TACTCTTTTT TACCCCAAGT AATTATGGAG
AAGCTGTGCA GTAAAGAAGA ACGAACCTAT CAATCAGAAC AGGATAAGTT GATGGAAATT
CCACCAACGA TAAATGAATT TGAATTACAG AATGGTAAGG TTATTCTTTA TGAAACCGTA
GATAGTCAAT CATTAACTAG ACAATATCAG GTAGAAACCA TACCATGTAA ACTTGGTAAG
GCGGTAGTGG TAACTAGAAG TACAACAATT GATAATGAAA CAAAAGTGGA TCAGTTAATA
CTTTCCATCA TGGATGATAA ATTTGATAAA GTGCTAGCCA AAGTAATTAA ACTGAATGCT
ATTGGAGGTA GTCACATTTC TATAAACGAA CAAGAAGTTA GTGTGGAGTA CTCAAAAAAT
CCTAAGAAAA TAATAGAAAA TGCATCAGAT AAGGAAATAG GAAAAATTTA TTTAACAGAT
GATGGCTGGG TTGAAAGAAA TTAA
|
|---|
| Protein sequence | MKKESKQYGE LNENDLKINM KAVYEGMKYQ SKSKQELLAR IQQIELRKND TSSEETHDYV
YLNLRNQKKI EGRGVSFLKL GARILTIAAV IFFVSVLIYN VHIRLEKQKE AAVDLNEVDQ
INKENKEQNE NKEQNENKQG EHNSQNSDSE QSHENQQNKE SNQINEEYGK DNLFGNEREV
PVRVSMEELH LTGEFRLSDC YLTNVVQPEN QYIIDKEGIL WGLGDNRAGQ LGQSVQGYFG
EAYVDYTKEP VKIAENVVHV DASRNYFAVY LTEDGSLYGM GANFDGLMGI KQVGSYFNHS
IDVCAIRPVL LMKDVAYARC GEYHILVLKK DGTVWKIGDT KDDSQKPDSM GTIDWYENTP
ISEPKKMLED AIYISTDSFQ CAAIRSDGTL WTWGDNRKGV LGTGNYEEGT VETPQQIATD
VNMVWLGEVA FNSTVTKITY GMRQSEARLP IPQMIIQKKD GTFWGCGVGF GEYEKIVSGE
KIKLSADLVP VGLTSKDSQI MNHELRDFPL GTSYFEVIQY LKKKQISYQA FEVSNEIEIS
HNYFGNQYAC SVLEFSDSGK LETIEIGFGF SPEGKIRVQS SVEEVQSIYG EEDISLYKNN
GSIIKEYVYA NGYLQISSRD GAVTNIKISK YSFLPQVIME KLCSKEERTY QSEQDKLMEI
PPTINEFELQ NGKVILYETV DSQSLTRQYQ VETIPCKLGK AVVVTRSTTI DNETKVDQLI
LSIMDDKFDK VLAKVIKLNA IGGSHISINE QEVSVEYSKN PKKIIENASD KEIGKIYLTD
DGWVERN
|
|---|
| |