| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3294 |
|---|
| Symbol | |
|---|
| ID | 5741573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4010368 |
|---|
| End bp | 4012065 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641294395 |
|---|
| Product | glutaminyl-tRNA synthetase |
|---|
| Protein accession | YP_001560387 |
|---|
| Protein GI | 160881419 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase
[TIGR00463] glutamyl-tRNA synthetase, archaeal and eukaryotic family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000133432 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGCG ATGTTAACAA ACTAGAGGTA AATGAGGCAG TAGAGAAAGA GGTTGTCTCA
AAAAACTTTA TTGAACAGAT CATTGATAAA GATATAGCTG AGGGACATTG TAAAAAGGTA
GTAACAAGAT TCCCGCCAGA ACCAAACGGA TATCTTCATA TTGGACATGC AAAGTCCATT
ATTTTAAATA GTGGATTAGC GAAAAAATAT GGTGGTACAT TCAATTTACG TTTTGACGAT
ACAAATCCTA CTAAGGAAAA AACAGAATTT GTCGAATCTA TTATTGAAGA TGTAAAGTGG
ATTGGTGGAG ATTTTGAGGA TCGACTTTTC TTTGCTTCTG ATTATTTTGA GCATATGTAT
GAAGGTGCAG TAAAGTTAAT TAAAAAAGGA AAAGCTTTTG TTTGCGATTT ATCTGCGGAA
GAGATGAGAG AGTATCGTGG AACTTTAACA GAGCCAGGAA AGAATAGTCC TTACCGTGAT
CGTAGCATGG AAGAAAACCT TGATTTATTT GAAAAAATGA AGAATGGTGA GTTCCCAGAT
GGTTCGAAGG TACTTCGAGC TAAGATTGAT ATGTCATCAC CTAATATCAA TATGCGTGAT
CCAGTAATTT ATCGTGTAGC GAGAATGACT CACCACAACA CTGGAGATAC ATGGTGCATT
TATCCGATGT ATGACTTTGC CCATCCAATT GAGGATGCGA TCGAAGGAAT TACACACTCC
ATCTGTACGC TAGAGTTTGA AGACCATAGA CCACTTTATG ACTGGGTAGT ACGTGAACTC
GAATACGAGA ATCCACCAAA GCAGATTGAG TTTGCAAAGA TGTACTTAAC CAATGTAATT
ACTGGAAAGC GCTATATCAA GAAATTAGTG GAAGATGGTG TTGTAGATGG TTGGGATGAT
CCAAGATTAG TAAGTATCAG TGCGTTAAGA AGAAGAGGAT TTACACCAGA ATCGATTCGT
TTGTTTATGG AGCTCTGTGG TGTTTCAAAG AGCAATAGCT CGGTAGATTA TACCATGCTT
GAGTATTGTA TTCGTGAGGA TTTAAAGTTA AAAGCAAACC GTGTTATGGC AATCATAGAT
CCAATAAAGC TAATTATTAC GAATTATCCG GAAGGACAAG TTGAGTATTT AGAAGCAATG
AATAATCAGG AAAATGAAGA AATGGGGACA AGAGAAGTAC CATTTAGTAG AGAGCTTTAT
ATCGAAAGAG AAGATTTCAT GATCGAGCCA CCTAAGAAAT ATTTCCGTCT CTTCCCAGGT
AATGAAGTTC GATTAATGAA TGCTTATTTT GTAACCTGCA CTGATTATAA AACAGATGAT
GCTGGTAATG TTACAGAAGT TTATTGTACG TACGATCCGG AAACAAAGAG TGGCTCTGGT
TTTAATGCAA GAAAGGTGAA AGGTACGATT CATTGGGTAT CTGCACCGCA TGCAATCAAG
GCAGAAGCCA GATTATATGA GAATCTAGTA GATGAGGAAA AAGGCGTTTA TAGCGAAGAT
GGTTCCGTAA ATCTTAATCC AAATTCTATT GTTGTTAGAG AGTGCTACGT AGAACCAAGC
TTACAGGGTG CAAAAGCATT TGATAGATTC CAGTTCTTAA GAAATGGATT CTTTTGTGTG
GATTGCAAAG ATTCCACAGA CGAAAAACTA GTATTTAATA GAATTGCATC ACTAAAGAGC
GGTTATAAGC CTGCATAA
|
|---|
| Protein sequence | MDSDVNKLEV NEAVEKEVVS KNFIEQIIDK DIAEGHCKKV VTRFPPEPNG YLHIGHAKSI
ILNSGLAKKY GGTFNLRFDD TNPTKEKTEF VESIIEDVKW IGGDFEDRLF FASDYFEHMY
EGAVKLIKKG KAFVCDLSAE EMREYRGTLT EPGKNSPYRD RSMEENLDLF EKMKNGEFPD
GSKVLRAKID MSSPNINMRD PVIYRVARMT HHNTGDTWCI YPMYDFAHPI EDAIEGITHS
ICTLEFEDHR PLYDWVVREL EYENPPKQIE FAKMYLTNVI TGKRYIKKLV EDGVVDGWDD
PRLVSISALR RRGFTPESIR LFMELCGVSK SNSSVDYTML EYCIREDLKL KANRVMAIID
PIKLIITNYP EGQVEYLEAM NNQENEEMGT REVPFSRELY IEREDFMIEP PKKYFRLFPG
NEVRLMNAYF VTCTDYKTDD AGNVTEVYCT YDPETKSGSG FNARKVKGTI HWVSAPHAIK
AEARLYENLV DEEKGVYSED GSVNLNPNSI VVRECYVEPS LQGAKAFDRF QFLRNGFFCV
DCKDSTDEKL VFNRIASLKS GYKPA
|
|---|
| |