Gene Cphy_3230 details

Gene Information

• Locus tag: Cphy_3230
• ID: 5742008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 3934575
• End bp: 3936731
• Gene Length: 2157 bp
• Protein Length: 718 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 641294330
• Product: hypothetical protein
• Protein accession: YP_001560323
• Protein GI: 160881355

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00921587
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAATA GAAAGAAGAA ATTGATAAAG CATTCAATCA GTATACTATT TTTTGCATTA 
TTTACTTTTT TCTCTATTAC AAAAGATGCA TCAGCTGCTA CAGTATCGAA GGTAACAGAT 
AGTAAGATAA CCTCTGTTAA ACAGCCATAT ATATTAATTA GTAATAAAAT ATCCGATATA 
ACGGAAGGAA AAACCTATCA GTTTACTGCT AAATCTGTTG GTTTGGAGAG TACAGATATT 
GTATGGTGGG TTTCTAATAA AGAGTTGGCT TCCATTAATT ATTATACGGG ATATTTTATC 
GCTAAAAATC CCGGAAAAAT TAAAGTTACT GCAAAAGATA GAAAAAGTGG TAAGATTTCT 
GCTTGTTATG TGGATATAGG ACTAGCAGAT GAGAATAAAG ATGAGGTACC ACTCAATAAG 
ATAATCATAT GGAAGGATGC TCAGATTGAA ACTGCGGCAA GAGGAAGTTT AGGTAAATAT 
AAAGGTCCCG TCACAATGGG AGAAGTCAAT TCTATTACAG AGCTTTTAGT GGAAAATACA 
AAAGATGCAT GGGGTTCTCA TTGCATGGAT TCTCTCGATG ACTTAAAGTA TTTTAAAAAT 
TTGAAAATAC TAAAGTTTAA TGATATTGGT TTATCGGTAA TTGAGGATAT ATCACCAATA 
TTGCAGTCAA AGAATCTAGA GGTACTTTCA ATAACATCAG TAAGTGATCG GTTAGAAAAA 
TTAAATGTTT TAACAAACTT GAAAGAGTTA GAAATAACCA TCTCAAAAAA GGATGAAAAA 
AATCTTACTT TTCTATATGA TATGCCAAGC CTTGAAAAGT TAAGTATTAG CGGCAGTAGT 
ATAAAGTCTC TGAAAGGGAT TGAAAAGTTA CCACACCTAA AGGAATTAAA TATAATCTCC 
ATGCCAGAAC TTAATGATAT TTCTGCATTA AAAAATTTAT CAAATCTACA AAAACTTTCA 
ATTTTTACAG CACTTTCAAA TGAGAAATTA AAAGATTTTA GTGTTATTAG CAAAATTAAT 
AATTTAAAGG AACTATACTT GCATACGGAT TACATAGAAA AATTCAATTT TTTGCAAGGC 
TGTAACAAAT TAGAGGAATT GAATATTGTG ACATCTGAAA TACAAGATGT TACTGTTTTT 
TCGACGCTTC CCAAATTAAG AGCTATTAAA TTGTCTAGTT ATAAAGAAAG TGAATTTAAG 
GGATTTGAAC AGTTAACTCA GATTCAAACA TTAGAATTTA CGAATCACTT AATAAAGGAT 
ATCAACTTTT TAAGTCAATG TACGGGGCTT AAAAATCTAT ATTTAAGTAC GTTTCAATTA 
AATGATATCA GTGGAATTTC AACCTTAACT AATATTGAAA AACTTCGGGT AAATAGCACT 
GAAATTACTG ATATATCTCC GTTTACAAAA CTAAAAGCTT TAAAAGAATG TGTATTAAGT 
GTTAATACGG ATAACTTAGA GCCATTAAGT TATCTAAACA ATATAGAAAC ATTAGAGATT 
TCTGGTCATA ATTTTCTATC CATTGAACCA TTACAGCAGT TAAAAAAATT AAAGAATTTA 
AAGATTTTAA ATTCAAATCT AGAAAATATA AAACCGTTAG ATTCATTGAT TAATCTAGAA 
ACATTATCTT TGGAATGTCC TAATATAACG AGTATTGAGC CAATTAAAAA ACTAACTAAA 
TTACAGGAGT TAGCGATTTC ATGTAATAAG CTTGAAGCAT TAAATGCATT GAGTAATCTT 
AAAAATTTAA AATCGCTATG TCTAGATATT AAAGATTTGC CATGTATGAA AGAGCTTGAA 
TCATTAAATA ATCTAGAGGG TTTAGATATA GCTGATATTA AGGTTGATGA ACTGGAGCAT 
TTAAGAAAGT TAAGTTCATT AAAACAGTTA AAAATATGGA CGAATAATAT TATTTCAGAT 
GCGTCTTTTA TAAACGAATT AAATAAACTT GAGTCATTAT ATATTGGATA TCAAGTAAGT 
AATCTTTCTT TCTTAGAAAA CAATTTTAGT TTAATGAAAG TGTATGTTCA TGCCCCAAAT 
CTAAAAGACT ACACATTATT AGATAATGCT GATTTTGAGG AATGTACAGT ATATACTAAT 
CTAAAGACAA TTGTCATAAG AAATGGGGTA ACTGATATGA TATATCATTT AGAATGA 

 

Protein sequence

MNNRKKKLIK HSISILFFAL FTFFSITKDA SAATVSKVTD SKITSVKQPY ILISNKISDI 
TEGKTYQFTA KSVGLESTDI VWWVSNKELA SINYYTGYFI AKNPGKIKVT AKDRKSGKIS 
ACYVDIGLAD ENKDEVPLNK IIIWKDAQIE TAARGSLGKY KGPVTMGEVN SITELLVENT 
KDAWGSHCMD SLDDLKYFKN LKILKFNDIG LSVIEDISPI LQSKNLEVLS ITSVSDRLEK 
LNVLTNLKEL EITISKKDEK NLTFLYDMPS LEKLSISGSS IKSLKGIEKL PHLKELNIIS 
MPELNDISAL KNLSNLQKLS IFTALSNEKL KDFSVISKIN NLKELYLHTD YIEKFNFLQG 
CNKLEELNIV TSEIQDVTVF STLPKLRAIK LSSYKESEFK GFEQLTQIQT LEFTNHLIKD 
INFLSQCTGL KNLYLSTFQL NDISGISTLT NIEKLRVNST EITDISPFTK LKALKECVLS 
VNTDNLEPLS YLNNIETLEI SGHNFLSIEP LQQLKKLKNL KILNSNLENI KPLDSLINLE 
TLSLECPNIT SIEPIKKLTK LQELAISCNK LEALNALSNL KNLKSLCLDI KDLPCMKELE 
SLNNLEGLDI ADIKVDELEH LRKLSSLKQL KIWTNNIISD ASFINELNKL ESLYIGYQVS 
NLSFLENNFS LMKVYVHAPN LKDYTLLDNA DFEECTVYTN LKTIVIRNGV TDMIYHLE