Gene Cphy_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3215 
Symbol 
ID5741993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp3920328 
End bp3920966 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content33% 
IMG OID641294315 
Productintegrase, catalytic region 
Protein accessionYP_001560308 
Protein GI160881340 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCCTA AATATCTTAC TATTCAGTTT TTCAAAACAG AAAAAGATTG GGATATAAGC 
TGGATGTGTC AGCAATTAAA TGTTTCACGT ACAGGATACT ATAAGTGGTT GAATCGTGAA 
CAGCCAAAAG AAGAGATTGA AAACGAAAAG ATAGCTCTAT GGATCAAGGA ATACGATGAA 
AAGTTCAAAC ATACTTTAGG CTATCGTAGA ATGCGTAATT ACATTAACCG AGATAAAAAC 
AAGCATTATA GTAAAGGTAG AATACAACGT ATTATGCGTG TATATGGCAT CAAATCTGTA 
ATTAGAAAGC AGCGAAAACC GTATCGTTAT TCAACACCAG AAACAACTGC TGAAAATATT 
TTACATAGGG AATTTGAGGC TTCAAAACCT AATGAGAAAT GGGGAACAGA TGTTACAGAA 
TTCAAAGTGC CTATGAGTAA TAGGAAAGTA TATTTAAGTG CCATTCTAGA TTTTTATGAT 
AAGTCAGTAG TGTCATATGT ACTAAGCAAC CACAATGATA ACAAGCTTGT TTTTGATACA 
TATGACTTAG CACTTAAATC TAATCCAGAT GTCACACCCT CTTTCATAGT GATAGAGGAT 
TTCAATATAC AAACAAAGTT TTTCAGAAGA AACTTTTGA
 
Protein sequence
MEPKYLTIQF FKTEKDWDIS WMCQQLNVSR TGYYKWLNRE QPKEEIENEK IALWIKEYDE 
KFKHTLGYRR MRNYINRDKN KHYSKGRIQR IMRVYGIKSV IRKQRKPYRY STPETTAENI 
LHREFEASKP NEKWGTDVTE FKVPMSNRKV YLSAILDFYD KSVVSYVLSN HNDNKLVFDT 
YDLALKSNPD VTPSFIVIED FNIQTKFFRR NF