| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3171 |
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| Symbol | |
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| ID | 5743258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3870966 |
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| End bp | 3872483 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641294271 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001560265 |
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| Protein GI | 160881297 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.194336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAAAA TCTATGTATT TGACACAACC TTACGAGATG GAGAACAGGT ACCAGGAGCA
AAACTTAATT TTGAAGAAAA GATGTATATT GCAAAACAAT TAGAGAAGCT AAGAGTAGAC
TATATGGAAG CAGGATTTCC GTCCTCCTCA CAAGGTGATT TTGAGGCAGT CCGAGAAATT
AGTAGACAAA TAAAGGATTC TTCCGTGGTT GCTTTAGGAA GGGCAGTAAA ATCTGATATT
GACCGTATGT ATGAAAGCTT AAAAGAAGCA GCAAATCCAA TGATTCATAT TGTGTTAGGA
TCCTCTAATG TTCATATCAC AAAAAAATTT AATAAGAACC CAGAGGATAT CTTACAGATG
GGGGTAGATG CAGTTACATA TGCAAAACGC TATACTTCAC AGGTGGAATA CTCTCTAGAG
GATGCGAGTC GTTCTGACTT AGAGTATATG TGGAGAACAA TTGAGGCAGT AGTAAAGGCT
GGTGCTACCT GCGTAAATAT ACCAGATACG GTAGGTTTTG CAGTTCCCGA GTTATTCGGC
GGTTTAATCC ATCAAATCTA TGATCGTCTT CAGAATGTAG CACCACATGT ATTATTAAGT
GTACATTGCC ATAATGACTC TGGACTTGCA ACAGCAAATA CTTTAGCAGC TGTACGAAAT
GGTGCAAATA AAGTGGAGTG CACGATTAAT GGAATAGGAG AAAGAGCAGG CAATACCTCC
TTAGAAGAAG TTGTTATGGG GATAAAACTT CATCCAGAAT ATTATGACGG TTATACCGAC
ATCAATCATT CCGCTATTTA TGAAACCTCC CGAATCGTAA GTCGTACCAT GGGCCTTGAC
GTTCAAGTAA ATAAAGCGTT GGTAGGGGAA AATGCCTTTG CGCATTCTTC CGGAATTCAT
CAGGATGGTC TTTTAAAGTC AAAGGAGGTG TATGAGATAT TTGAACCTTC GGATATCGGT
GCTCCTCCTA TGGATATTGT ACTTACCGCT CGTTCTGGAA AACATGCATT TGAATATATC
TCTAAAAAAC TTGGTTATGA AATTGCACCA GAGGTATTAA ATGAGATTCA TGCTAATTTC
TTAAAAATAG CAGACGAGAA AAAGGAAGTC TATGATAATG ATGTCATTGA TTTACTAGAC
GGAGATGAAA GAGTACAAAA GAATGGAGAA AAGAAGTTAT GGATGCTAGA AGATTTTCAG
ATAAATGTAA ATATGAATCT ACCGTCTGCA ACCGTGAAAT TAGTAAGAAA TAAGCAAGAG
GCTGTGGTTA GTGAAGCTGG AAATGGTGCA ATCTCAGCAT TATATGCAGC GATTTTAAAA
GCAGTCGATA TGCCAATTCA TCTTATCGAT TATCGTATTC AAAATATTGG TGCAGAAAAA
GAATCCTTAG GAAAAGTGGT TGTGCAGATA CAATATAACG GAAAATTTTA TTTCGGAAAA
GCAATTGAAA GAGATGTTAT GAAAGCAAGC GCATTAGCTC TCGTAAATAG CGTGAATAAA
ATCGTATTAA ATAGTTAA
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| Protein sequence | MRKIYVFDTT LRDGEQVPGA KLNFEEKMYI AKQLEKLRVD YMEAGFPSSS QGDFEAVREI
SRQIKDSSVV ALGRAVKSDI DRMYESLKEA ANPMIHIVLG SSNVHITKKF NKNPEDILQM
GVDAVTYAKR YTSQVEYSLE DASRSDLEYM WRTIEAVVKA GATCVNIPDT VGFAVPELFG
GLIHQIYDRL QNVAPHVLLS VHCHNDSGLA TANTLAAVRN GANKVECTIN GIGERAGNTS
LEEVVMGIKL HPEYYDGYTD INHSAIYETS RIVSRTMGLD VQVNKALVGE NAFAHSSGIH
QDGLLKSKEV YEIFEPSDIG APPMDIVLTA RSGKHAFEYI SKKLGYEIAP EVLNEIHANF
LKIADEKKEV YDNDVIDLLD GDERVQKNGE KKLWMLEDFQ INVNMNLPSA TVKLVRNKQE
AVVSEAGNGA ISALYAAILK AVDMPIHLID YRIQNIGAEK ESLGKVVVQI QYNGKFYFGK
AIERDVMKAS ALALVNSVNK IVLNS
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