| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3142 |
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| Symbol | |
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| ID | 5743228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3835337 |
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| End bp | 3836242 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641294241 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001560236 |
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| Protein GI | 160881268 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATGT TAACGAAAAT GAATGCGGCT CTTGATTATA TTGAAAATAA TCTAACTGAG
GATATTGATT TTACAATAGT AGCCCAAAAA GCTTGTTGTT CATCATATAA TTTTCAGCGT
ATGTTCTCTT TTATTACAGA TGTGCCAATA GCCGAATATA TACGTAGAAG ACGTTTAACA
CAAGCGGCAA TAGAATTACA AAATACTAAT GCTAAAGTAA TTGATGTAGC ATTGAAATAT
GGATATGACT CGACAGTTTC TTTTTCCAGG GCGTTTTCAA ATATTCATGG TATTACACCT
AATGAAGCTA AACAATCAGG CGTAGAATTG AAAGCTTATC CCAAAATCTC CTTTCAAATT
TCAATTAAAG GAGAGAAAGA AATGAATTAC AGAATTGAAA CAAAAGAAGC TTTTGATGTT
TTTGGAATCG AAACAGTTGC ATCTTTATCA GGAGAAGATA GTTTTGTGAG CCCTGCTGAA
TTATGGCGAA AGTCGCATCA AAATGGTGAT TACGAAAGAC TATTTAATGC ATCAGGGGAT
TTACCAAAAT TTATTTCTCA GGATTTATGT AAAATCCATG GCGTTGAAAA TTACCGGAAA
ACAGAAGGAA ATACATTCCC ATATATGTTA TGTTCCTTTG TTTCGGATAG CTTCAAAACG
GATGGCTATA CAATCCAACA TATACCCTCA CAGACATATG CCATATTTCC ATCGGAAAAA
TTTATGTGGA ATGAAGGTTC TATGGAAGTT TTGAGAAATC TTCAAAAAAG ATTCTATTCA
GAATGGCTAC CTACTGCTAA TTATGAAAGA GTTTCCGGTG CGAATTTTGA GATTTATGGT
GGGGACAAAG AATATGGTTA TATTGAATTG TGGTTTCCCG TTAAGCAACT TAGCATCACA
AAATGA
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| Protein sequence | MDMLTKMNAA LDYIENNLTE DIDFTIVAQK ACCSSYNFQR MFSFITDVPI AEYIRRRRLT
QAAIELQNTN AKVIDVALKY GYDSTVSFSR AFSNIHGITP NEAKQSGVEL KAYPKISFQI
SIKGEKEMNY RIETKEAFDV FGIETVASLS GEDSFVSPAE LWRKSHQNGD YERLFNASGD
LPKFISQDLC KIHGVENYRK TEGNTFPYML CSFVSDSFKT DGYTIQHIPS QTYAIFPSEK
FMWNEGSMEV LRNLQKRFYS EWLPTANYER VSGANFEIYG GDKEYGYIEL WFPVKQLSIT
K
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