| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3071 |
|---|
| Symbol | |
|---|
| ID | 5743397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3756121 |
|---|
| End bp | 3757503 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641294172 |
|---|
| Product | V-type ATP synthase subunit B |
|---|
| Protein accession | YP_001560167 |
|---|
| Protein GI | 160881199 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1156] Archaeal/vacuolar-type H+-ATPase subunit B |
|---|
| TIGRFAM ID | [TIGR01041] ATP synthase archaeal, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAGG AGTATAAAAC CATACAAGAA GTTGCAGGCC CTTTGATGCT AGTAAAAGGT
GTTACTCAGG TTGCCTACAA CGAGCTTGGT GAAATAGAGT TAGCAAATGG TGAAAAAAGA
AGATGTAAGG TTCTTGTAAT TGACGGAGAA AATGCTCTCG TCCAATTATT TGAAAGCTCA
ACGGGTATCA ACTTATCCGA TAGTAAAGTA CGATTTCTAG GCAGGGGAAT GGAATTAGCA
GTTTCAGAAG ATATGCTTAG TCGTGTATTT GACGGACTTG GTCGTCCTAT CGATGGAGGT
CCAGAAATTT TACCGGAAAA AAGAATGGAT ATCAATGGGC TTCCTATGAA TCCAGTTGCT
AGAAATTATC CACAGGAGTT TATTCAAACA GGAGTATCCG CTATTGATGG TCTAAATACA
CTAGTCCGTG GTCAAAAACT TCCGATATTC TCAGCAAGTG GTTTACCACA TGCAGAGCTT
GCTGCCCAAA TTGCAAGACA GGCCAAGGTA AGAGGAACGA ATGAGGCATT TGCGGTTGTA
TTTGCAGCGA TGGGAATTAC GTTTGAAGAA GCCAACTTCT TTACGGAGAG CTTTAAAGAA
ACAGGAGCGA TTGATCGTAC CGTAATGTTT GTAAATCTAG CTAACGATCC AGCGGTGGAG
CGTATTGCGA CGCCAAGAAT GGCTCTTACT GCTGCGGAAT ATCTTGCTTT TGAAAAGGAT
ATGCATGTAT TAGTTATTTT AACTGATATC ACAAACTATG CGGATTCCTT ACGTGAAGTT
TCAGCAGCAA GAAAAGAAGT GCCTGGGCGT AGAGGTTACC CTGGATATAT GTATACGGAC
TTAGCATCAT TATATGAAAG AGCAGGAAGA CAAAAAGGAA AGAATGGAAG TATTACTATG
ATTCCAATCC TTACTATGCC AGAAGATGAT AAAACACATC CAATTCCAGA CCTTACTGGT
TATATTACCG AAGGTCAGAT TATCTTAAGT AGAGATCTAT ATCGACAAGG AGTCACACCA
CCAATTGATG TATTACCATC TCTTTCAAGA TTAAAGGATA AAGGTATTGG AGAAGGGAAA
ACAAGAAAAG ATCATGCCAA TACTATGAAT CAATTGTTTG CTGCTTATGC TAGAGGTAAG
GAAGCAAAAG AATTGATGGT TGTGCTTGGT GAGGCAGCGT TAACTGACAT TGATAAATTG
TATGCTGAAT TTGCGGATAC CTTTGAACGA GAATATGTCT CACAAGGATA TTATAATAAC
AGAGACATTG AAGGAACATT AAATCTCGGA TGGAAACTGC TCTCCATTTT ACCAAGAACT
GAATTAAAAA GAATTAAGGA TGAATTCCTC GATGAGTATT ACGGAAAAAC GATGGGGGTG
TAA
|
|---|
| Protein sequence | MPKEYKTIQE VAGPLMLVKG VTQVAYNELG EIELANGEKR RCKVLVIDGE NALVQLFESS
TGINLSDSKV RFLGRGMELA VSEDMLSRVF DGLGRPIDGG PEILPEKRMD INGLPMNPVA
RNYPQEFIQT GVSAIDGLNT LVRGQKLPIF SASGLPHAEL AAQIARQAKV RGTNEAFAVV
FAAMGITFEE ANFFTESFKE TGAIDRTVMF VNLANDPAVE RIATPRMALT AAEYLAFEKD
MHVLVILTDI TNYADSLREV SAARKEVPGR RGYPGYMYTD LASLYERAGR QKGKNGSITM
IPILTMPEDD KTHPIPDLTG YITEGQIILS RDLYRQGVTP PIDVLPSLSR LKDKGIGEGK
TRKDHANTMN QLFAAYARGK EAKELMVVLG EAALTDIDKL YAEFADTFER EYVSQGYYNN
RDIEGTLNLG WKLLSILPRT ELKRIKDEFL DEYYGKTMGV
|
|---|
| |