Gene Cphy_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3043 
Symbol 
ID5743369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3720397 
End bp3721830 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content38% 
IMG OID641294144 
Productadenylosuccinate lyase 
Protein accessionYP_001560139 
Protein GI160881171 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG ATAACTATGT AAGTCCGTTG TCAGAACGTT ATGCAAGTAA GGAAATGCAA 
TATACCTTTT CACCAGATAT GAAATTTCGT ACTTGGAGAA AACTTTGGAT TGCCTTAGCA
GAGGCTGAAC ATGAGCTTGG GCTACCAGTG ACAAGTGAAC AGGTAGAAGA GTTAAAAGCA
CATCAGGATG ATATTAATTA TGAAGTGGCG AAAGAAAGAG AACGTTTGGT TCGCCATGAT
GTAATGTCAC ATGTGTATGC ATATGGCGTT CAATGTCCCA ATGCAAAAGG GATAATTCAC
CTTGGTGCAA CTTCTTGCTA TGTTGGTGAT AATACCGATA TTATTGTAAT GACAGAAGGC
TTAAAACTTG TTAAGAAGAA GTTGATTTGT GTCATGGAAG AACTTTCAAA ATTTGCTATG
AAATATCGTG ATCTTCCAAC ACTTGCTTTT ACCCATTTCC AACCAGCACA ACCAACGACC
GTAGGAAAAA GAGCAACTCT ATGGCTACAA GAGTTGGCTC TTGATTTGGA AGATCTTGAG
CATGCACTAT CTTGTATGAA ATTACTTGGT TCCAAAGGAA CTACAGGGAC TCAAGCAAGC
TTTTTAGAAT TATTTGATGG TGATCATGAG AAGATAAAGA AATTAGATGC CTTGATTGCG
AAAAAGATGG GCTTTGAGGA GTGTTTTGCT GTATCCGGTC AGACTTATTC AAGAAAAGTG
GATACCAGAG TTTTGAATGT ACTTGCAGGA ATTGCAGCAA GCGCTCATAA GTTTAGCAAT
GATATTCGTT TACTTCAACA CTTAAAGGAA ATTGAAGAAC CATTTGAGAA GAATCAGATT
GGATCCTCTG CAATGGCATA TAAGAGAAAT CCTATGAGAA GTGAGCGTAT CGCCTCTCTC
GCTCGTTATG TGATGGTGGA TGCACTAAAT CCAGCGATTA CTTCCGCTAC ACAGTGGTTT
GAAAGAACCT TAGATGATTC TGCAAATAAA CGATTAAGTG TACCAGAAGC ATTTCTTGCA
ATCGATAGTA TTCTTGATTT ATATATGAAT GTAGTGGATG GCTTGGTAGT TTATCCAAAG
GTAATTGAAA AACGCTTAAT GTCAGAGCTT CCGTTCATGG CGACAGAAAA CATCATGATG
GATGCTGTAA AAGCGGGTGG AGACCGCCAA GAGCTACACG AAAGAATTCG TACTCTAAGC
ATGGAAGCTG GCCGTAATGT GAAAGAACTA GGATTAGAGA ATAATCTTTT AGAATTAATT
GCAGCTGATC CAGCCTTTAA TATGACCTTA GAGGATTTAA AGAAGGTAAT GGAACCATCT
AGATATACTG GAAGAGCAAA AGAGCAGACC GAAGAATTTA TAGAATCAGT GATACGCCCA
ATCCTTGAAG AGAACAACGA GTTACTTGGA TTTAAGGCAG AAATTAATGT ATAA
 
Protein sequence
MSQDNYVSPL SERYASKEMQ YTFSPDMKFR TWRKLWIALA EAEHELGLPV TSEQVEELKA 
HQDDINYEVA KERERLVRHD VMSHVYAYGV QCPNAKGIIH LGATSCYVGD NTDIIVMTEG
LKLVKKKLIC VMEELSKFAM KYRDLPTLAF THFQPAQPTT VGKRATLWLQ ELALDLEDLE
HALSCMKLLG SKGTTGTQAS FLELFDGDHE KIKKLDALIA KKMGFEECFA VSGQTYSRKV
DTRVLNVLAG IAASAHKFSN DIRLLQHLKE IEEPFEKNQI GSSAMAYKRN PMRSERIASL
ARYVMVDALN PAITSATQWF ERTLDDSANK RLSVPEAFLA IDSILDLYMN VVDGLVVYPK
VIEKRLMSEL PFMATENIMM DAVKAGGDRQ ELHERIRTLS MEAGRNVKEL GLENNLLELI
AADPAFNMTL EDLKKVMEPS RYTGRAKEQT EEFIESVIRP ILEENNELLG FKAEINV