Gene Cphy_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3029 
Symbol 
ID5743355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3700293 
End bp3701468 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content41% 
IMG OID641294130 
Productglycosy hydrolase family protein 
Protein accessionYP_001560125 
Protein GI160881157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACAA TGGAAACACT TAAGAACTAT GAGGTAATCA CGATAGAGGA AGCACGTGAA 
GCACTAAACC ATGTGATTGC TCAGGTTAAA AATAATATTC CGGAATTTTA TGATAGTTTT
CCGGCAGCAA ATAGCGTCAA TCAGATTTAT CCTGCTACGA AAAACGATGA CTGGACCAAT
GGATTTTGGA CTGGACAGTT GTGGTTGGCA TATGAAGAGA CAAAGGAGGG GACTTTTAAA
GAAGCTGCCC TTCATCAAGT GCCAAGCTTT AAAGAACGTC TGGTAAAGAG AATTGTTGTA
GATCATCATG ATATGGGATT TTTGTATACC CCGTCCTGTG TTGCGGCTTA TAAACTAACA
GGTGATTCGC TAGCTAAAGA GACTGCTGTG ATGGCAGCAG ATAATCTGAT GGGACGTTTT
CAGGTGAATG GAGAATTCTT TCAGGCTTGG GGGCAATTAG GTGATCCTAA AGAATATAGG
TTAATTATTG ATTGCCTTTT AAATATGCCT TTGTTATTCT GGGCATCAGA GGAAACAAGG
AATCCAAAAT ACCGCGAAAC AGCACTTCGC CATATTCGGA CAAGCATGAA CTATGTAGTT
CGTGAAGATT CCTCTACCTA CCATACCTAT TATTTTGACC CAGAAACAGG GGCTCCGGTA
CGTGGAGTAA CTGCACAGGG ATATCGAGAT GGTTCCATAT GGGCAAGAGG CCAGGCATGG
GGAATCTATG GTTCAGCAAT CGCTTATAAA TATTGTCCGG ATCCAATTTA TATTGAAAGT
TTTAGAAAGA TTACAGCATG TTTTCTAGAA CATTTACCAG AAGATCTGGT ACCTTATTGG
GATTTTGACT TTACTGATGG TAGTACGGAG CCAAGAGATT CTTCCTCTGC GGCCATAGCA
GCATGTGGAA TGCTTGAAAT GGCAAAGTAT CTAGAACCAG AGGAAGCAAA GACTTATATT
CAACTAGCGA AACGTTTATT AAAGGCGCTG ACAAAGCACT GCTTATATCG TTCTAGTGAA
GATACCAACG GAATATTACT TCATTCCACC TATGCAAAAA GTTCTCCTTA TAACACAGTA
AAGGATAGTG GTGTTGATGA ATTTACATTG TGGGGAGATT ACTTTTATAT GGAAGCACTT
GTGAGGCTTA CAACACAGTG GGAAGTTTAT TGGTAG
 
Protein sequence
MQTMETLKNY EVITIEEARE ALNHVIAQVK NNIPEFYDSF PAANSVNQIY PATKNDDWTN 
GFWTGQLWLA YEETKEGTFK EAALHQVPSF KERLVKRIVV DHHDMGFLYT PSCVAAYKLT
GDSLAKETAV MAADNLMGRF QVNGEFFQAW GQLGDPKEYR LIIDCLLNMP LLFWASEETR
NPKYRETALR HIRTSMNYVV REDSSTYHTY YFDPETGAPV RGVTAQGYRD GSIWARGQAW
GIYGSAIAYK YCPDPIYIES FRKITACFLE HLPEDLVPYW DFDFTDGSTE PRDSSSAAIA
ACGMLEMAKY LEPEEAKTYI QLAKRLLKAL TKHCLYRSSE DTNGILLHST YAKSSPYNTV
KDSGVDEFTL WGDYFYMEAL VRLTTQWEVY W