| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3019 |
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| Symbol | |
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| ID | 5743345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3686677 |
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| End bp | 3688038 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294120 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001560115 |
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| Protein GI | 160881147 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000108454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAT CAAACGCAAA AGATATGACG CAGGGAAGTC CAACCAAATT AATATTTTTC
TTCTCTATCC CCTTACTGAT TGGAAATGTA GTCCAACAGC TTTATAGTAT GACAGACACG
ATTATCGTTG GACAGTGTCT TGGCTCGAAT GCTTTGGCAG CGGTAGGAAC AACCGGACCG
CTTAGCTTTT TAATTTTAGG TTTTGTGATT GGAATTACAA GTGGAATCGC GGTGATAGCT
GCTCAACGTT TTGGAGCAAA AGATGAAGAA GGATTGAAGC GCTCCGTAGC TACTTCAATT
ATACTTGGAA TTTCTATTAC GATTATTATA ACAGTATTAG CAGTTTTACT TGCAAAGCCT
TTATTACTTC TTATAAATAC ACCAGAAACA ATTTTACAAG AGGCTTATGA CTACATTGTA
GTAATCTTTC TTGGTGTGTT TGCTTGTATG CTCTATAATA TGATAGCATG CCTGCTTCGC
GCAATTGGAG ATAGCAGGAC TCCACTTTAT TTTTTAGCAG TCTCTTCTAT TTTAAATATT
GGGTTAGACT TTTTATTTAT TCTTACATTT GATATGGGGG TTGCAGGGGC GGCTTGGGCA
ACTGTATTAT CCCAGTTTTT ATCTGGTCTT GCATGTGTAA TTTATGCATT TGTAAAATAT
CCGATGCTTC GTGTATCCAA AAAAGATTTT CATTTGGATC TCAGATTTGC TTGGAAACAT
TTGCAGATTG GATTACCTAT GGCATTTCAG TTCTCCATCA CAGCGATTGG TGTGATTATC
TTACAAGGTG CACTAAATCT ATTTGGAGAA GATAAAATTG CGGCATTTAC CGCAGGGTCA
AAAGTTGAGC AGTTGGTAAC ACAGCCAGCT GGAACCTTTG GTGTTACAAT GGCTAATTTT
ACAGGACAAA ATTTAGGCGC GAATCGTTTG GATCGAATTA AAGTTGGGGT CAGAAAGTGT
GCTATGCTAA CCCTTTCCTT TGCAGTATTG GCTATGATCT TATTGCAGAT TTTTTCAAAG
CCACTGCTTT ATTTATTCGA TGTTGGAAAT AACCCAGTTA TAATGGATGC TGCATTGATG
TATTTACGAT TATGCTCCAT CTTTTTCCCA TTCTTATTCC TGATATTTGT TTACCGAAAT
GTGTTACAAG GAGTCGGAAG AAGTTTTATG CCATTAATGG CTGGTGTTTT TGAATTAGTA
GCTCGTTCTG CAGCAGCATT TATATTACCA GGACTTATGG GATATGCAGG TATATGCTTG
GCAGGACCTG CAGCTTGGGT AGCAGCGTCT ATTTTACTTT TTGTTTCTTA TCATATTGTA
ATAAGGCAAG TAGAAAAACA ATATGCGGGG AAAACACGTT AA
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| Protein sequence | MAKSNAKDMT QGSPTKLIFF FSIPLLIGNV VQQLYSMTDT IIVGQCLGSN ALAAVGTTGP
LSFLILGFVI GITSGIAVIA AQRFGAKDEE GLKRSVATSI ILGISITIII TVLAVLLAKP
LLLLINTPET ILQEAYDYIV VIFLGVFACM LYNMIACLLR AIGDSRTPLY FLAVSSILNI
GLDFLFILTF DMGVAGAAWA TVLSQFLSGL ACVIYAFVKY PMLRVSKKDF HLDLRFAWKH
LQIGLPMAFQ FSITAIGVII LQGALNLFGE DKIAAFTAGS KVEQLVTQPA GTFGVTMANF
TGQNLGANRL DRIKVGVRKC AMLTLSFAVL AMILLQIFSK PLLYLFDVGN NPVIMDAALM
YLRLCSIFFP FLFLIFVYRN VLQGVGRSFM PLMAGVFELV ARSAAAFILP GLMGYAGICL
AGPAAWVAAS ILLFVSYHIV IRQVEKQYAG KTR
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