| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3001 |
|---|
| Symbol | |
|---|
| ID | 5743327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3661586 |
|---|
| End bp | 3662899 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641294102 |
|---|
| Product | phosphopyruvate hydratase |
|---|
| Protein accession | YP_001560097 |
|---|
| Protein GI | 160881129 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0148] Enolase |
|---|
| TIGRFAM ID | [TIGR01060] phosphopyruvate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000734369 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TATTAAGTAT TGAAAAAGTA AAAGGTAGAG AAATCTTAGA CTCCAGAGGA
AATCCAACAG TGGAGGCAGA AGTTATTTTA AGTGATGGTA GTGTGGGTAT GGCTGCTGCA
CCATCTGGTG CCTCTACAGG CGCATTTGAG GCAGTAGAAT TAAGAGATGG AGATAAAGGG
CGTTATCTTG GTAATGGCGT ATTAAATGCA GTTGAACACG TAAAGAAAGA ACTCTCAGAA
GCGGTATGTG GAAGAAACCC ATTAAACCAA GTTGAGATTG ATGCCGCAAT GATTGATGCA
GATGGTACAG AGAATAAGGG AAAGCTTGGT GCTAATGCAA TCTTAGCAGT TTCTCTTGCA
ACAGCAAAAG CGGCAGCAAC TGCTGTTTCC CTTCCATTAT ATCAATATCT TGGCGGTACA
AATGCAAGAA CTCTTCCGGT ACCTATGATG AATATCATTA ATGGTGGAAA GCATGCAGAT
TCTAGTTTAA ACATCCAGGA ATTTATGATT ATGCCAGTGG GTGCTAAGAG CTTTTCAGAA
GCGTTAGAGC ACAGTACAAC CGTATTTCAT ACTTTAAAGA AATTATTAAA AGCAGATGGA
TATGTAACTG CTGTAGGTGA TGAGGGTGGA TTTGCACCGA AGTTTAATTC GGATGAGCAA
GCTCTTGAAT ATATCGTAGA AGCAATCAAA AAAGCAGGGT TTGAGCCAGG TTCTGATTTC
TATATTGCGA TGGATGCTGC GGCTACCGAA ATGTATGATG AAGCAAAGAA GATTGGAAAA
GAAGGAAACT ATCTGTTCTG GAAGTCTGGA GAGTTAAAGA CTGTAGATGA GATGATTGAT
TATTGGGAGA ATCTATGTAA TAAATATCCT ATTCTTTCCT TAGAAGATGG TTTAGCAGAA
GAAGATTGGG AAGGTTGGAA GAAGTTAACC GAGCGTCTTG GATCACGTAT ACAGCTTGTT
GGAGATGATT TATTTGTTAC TAACACAAAC CGTATTTCAA AGGGAATTAA AGAAGATATA
TCTAATTCTG TACTAATTAA GTTCAATCAG ATTGGTTCTC TGACTGAAAC CTTAAATGCG
ATTGAGATGA CAAAGAATCA AGGATGGACA GCGATCGTTT CTCATCGTTC CGGTGAGACG
GAAGATACTA CAATTGCAGA TATTGCGGTA GCTACAAATG CTGGTCAGAT TAAGACCGGT
GCACCATCTA GAAGTGATCG TGTTGCTAAA TATAATCAAT TGCTTAGAAT TGAACAAGAA
TTGGGTCAGG CAGCTATTTA TCCTGGTAAA AAAGCATTCA AAGTTTTAAA ATAA
|
|---|
| Protein sequence | MKKLLSIEKV KGREILDSRG NPTVEAEVIL SDGSVGMAAA PSGASTGAFE AVELRDGDKG
RYLGNGVLNA VEHVKKELSE AVCGRNPLNQ VEIDAAMIDA DGTENKGKLG ANAILAVSLA
TAKAAATAVS LPLYQYLGGT NARTLPVPMM NIINGGKHAD SSLNIQEFMI MPVGAKSFSE
ALEHSTTVFH TLKKLLKADG YVTAVGDEGG FAPKFNSDEQ ALEYIVEAIK KAGFEPGSDF
YIAMDAAATE MYDEAKKIGK EGNYLFWKSG ELKTVDEMID YWENLCNKYP ILSLEDGLAE
EDWEGWKKLT ERLGSRIQLV GDDLFVTNTN RISKGIKEDI SNSVLIKFNQ IGSLTETLNA
IEMTKNQGWT AIVSHRSGET EDTTIADIAV ATNAGQIKTG APSRSDRVAK YNQLLRIEQE
LGQAAIYPGK KAFKVLK
|
|---|
| |