Gene Cphy_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2854 
Symbol 
ID5745127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3502213 
End bp3503712 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content32% 
IMG OID641293955 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001559953 
Protein GI160880985 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000642568 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT CCTTACGATT GAAAATAACA TTTTTACTTA CTATATCGCT GGCATTAACG 
ATTTTTTTGT GCTGGGGATT AAATAAATCC TTTTTAACTG ATTACTATCA GTATAGTAAG
ATAAAATCTT TGGATTCAGT ATTTTATGAG GTTAATAATA CTTTCAATGA AAGCAGTCAA
AAAGGTTTAA CTCAAGAACA ATTAGTAATG ATGGATAGTA TGATTTCGAA AAACAATGCA
AGTGCATATA TCTCAGATAT GGATTTAGGA TTGGTATATC GATCGAATGG AACTGATCGT
GACACTCAAC GAGTAAAGAA ATCAATGAAA GCGTACTTAT ACGGAAATAC GCCAGATACA
TTAATTGATA AAATAAAATG GATTAAAACC GTTGATAATA AATACGATAT TTATATCCAA
CATGATGCAT TGATGCAGAT GAATTATATT GACTTGATTG GAATATTAGA TACTGGATTT
ATCGTATTCA TACGAACTAA CATGGAAAAT CTTCAGGCGA GTTCTGCGAT ATCCAATAAT
TTCTTAGCTT ATGTCGGAAT TTTTGTAACT GTTGTTGGTA CGATAGTTAT GTACTTTATT
AGCAGAAGTT TCACGAAACC TATTTTGGTA TTAGAAAACA TCGCCAAGAA AATGTCAAAC
CTAGATTTTA ATGCGAAGTA TGAAGGAAAG TCACAAGATG AAATTGGACA GCTTGGGAAT
AGCATTAATA TGCTTTCTGA AAAATTAGAG CAAACAATTT CTGAATTAAA GGTTGCGAAT
ATTGAATTAC AATCCGATAT TGAAGATAAA GTACAAATTG ACGAGATGAG GAAGGAATTC
TTATCAAATG TCACTCATGA ACTAAAAACA CCAATCGCTC TCATACAAGG GTATGCAGAA
GGTCTTAAAG ATAATATTTC GGAGGATGAA CAGAGTAGGG AGTTTTATTG TGAAGTCATT
ATTGATGAAG CAATGAAGAT GAATAAGATG GTAAAAAAAC TACTCAGTTT GAATCAATTA
GAATTTGGTA ATAATCAGCC GGAAATTATT CGTTTCGACA TTGTATCTCT TATTAATTCT
GTGATTCAAT CGACAGATAT CCTATGCAAG CAAAAAGAGA TTAGGATAAT CTTTGAAGAA
AAACAGCCAT GTTATGTATG GGCAGATGAA TACATGATTG AAGAAGTAGT GACGAATTAC
GTAAGCAATG CGATCAATCA TGCAGATGGT GCTAAAATAG TTGAAATCAA ATTGATTCAT
ATGGAGAATG TAGTTCGTGT AGCAGTTTTT AATACTGGTG AGTTAATTCC AGAAGAGGAT
TTAGAAAAAG TATGGATTAA GTTCTATAAA GTAGATAAAG CAAGAACACG AGAATATGGT
GGAAATGGTA TCGGTTTATC CATCGTAAAG GCTATTATGA ATGCACACAA TAAAGAATGT
GGTGTTGTAA ACCACTCAAA TGGTGTTGAA TTTTGGTTTG AATTAGATAT TACATCATAA
 
Protein sequence
MKHSLRLKIT FLLTISLALT IFLCWGLNKS FLTDYYQYSK IKSLDSVFYE VNNTFNESSQ 
KGLTQEQLVM MDSMISKNNA SAYISDMDLG LVYRSNGTDR DTQRVKKSMK AYLYGNTPDT
LIDKIKWIKT VDNKYDIYIQ HDALMQMNYI DLIGILDTGF IVFIRTNMEN LQASSAISNN
FLAYVGIFVT VVGTIVMYFI SRSFTKPILV LENIAKKMSN LDFNAKYEGK SQDEIGQLGN
SINMLSEKLE QTISELKVAN IELQSDIEDK VQIDEMRKEF LSNVTHELKT PIALIQGYAE
GLKDNISEDE QSREFYCEVI IDEAMKMNKM VKKLLSLNQL EFGNNQPEII RFDIVSLINS
VIQSTDILCK QKEIRIIFEE KQPCYVWADE YMIEEVVTNY VSNAINHADG AKIVEIKLIH
MENVVRVAVF NTGELIPEED LEKVWIKFYK VDKARTREYG GNGIGLSIVK AIMNAHNKEC
GVVNHSNGVE FWFELDITS