| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2800 |
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| Symbol | |
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| ID | 5742115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3407493 |
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| End bp | 3409214 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641293891 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001559899 |
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| Protein GI | 160880931 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG ATCTACTTGT ATTTCGGAAG AAGTTTTCAA GAGGCCTTGT GTTAGTTACA
TCGGTATTCT GGTTATATAC ATTAATTCAA TTGGTTGGTA ATTTATCAGA GCATGCAAGT
TTTGGAATAT TAGTAACCTC AGGCGCTCTT ATCATTGACA TCTTGGCTGA GCATACGAAA
TTATTTAAAA AGAGAATTGC GTGGATGATT CTTCGATCAA TCGAGTTGAT ATCATTTTCT
ATTTGTTTTT TTGTTACCAT TGGCTCAATA AATTCAATGT TTTTTGGAAT AGAGCTAATT
GCTGTAATGT TACAGTTGCT TATGTTAACT GACTTTTTAG ATGTTTATTC CAGAGCAATA
ACGTTAACAA CTATGTCACT TCCAGCAATT ATTTATTTAA TTTCAATAAT ATTACTAAAA
CCTGAAAGAC AAGAAGAGTT TTTTGGCATG GTATGTGCCT ATCTATCTCT TATCTTCGTC
GTAATGCTGA TATCAGAGTT AATCAGTGAG GTCTTTATTG CTACAGATAA GCGAATTTTT
GAAATACGTC GTTTTTCGGA ACAGACAAAA GAGACGAATG AAGCACTTAG AAATCAGCAG
GAAAAATTTC GTAAGGTAAA TGAGGAACTT GGCATTCAAA AAATTATGCT CGAAGCAGCT
TACCATAAGA TAAACAGTGC AAATACAGAA AATCAGACCT TATATCAGGT TATTCGATAC
ATCTCAACTG AGCTAGAGAT TGGAAATCTG ATGAAGCTTA TTACGGAAGC GATATATGAG
GCAATGGGAT TAGATGTATG TACCATCATT TTAGAACCGG ATATTGCTGG CAATAAACAG
GTTACCTATG AAATCCACTC CAGATTAGGT AAAGGTTTTT ACGAACAGAT GAGCAATCGT
ATAGAACAGG GATGCATTGA AGAATACATG AAGGAAGAAG GAAATTATAT TGATAATCAG
GTACAGCCTG GAAAATATTC TTTTCTGAAA GATCGTAAGA TAAACTCATT ACTAATTGTA
CCTTTAGTTC GTGAAAAAAA GGTAATTGGT GCTTTACTAT GCGGACATTC TCAGTTTGAA
TACTTTAATG GAAACATTAT TTTCTTCGAG ACTGTAGTTG CACAACTTTT AGTTGCAATC
CATAATGCAA GTCTTTATAG TAAGATGCAG CAGATGGCAA TTCGTGATAG TTTGACTGGA
ATCTATAATA GGGGACAGTT AAATGTGATT TTAGAGCAGT ATACAAAACG TGCAAGTGAA
CAAAATAAAT CGTTATCTGT TGCCTTACTT GATATTGACT TATTTAAGAA AATTAATGAT
ACATATGGAC ATCTGTTCGG TGATGAAGTT ATAAAGATGG TTGCATCGAA ACTGCAGGAG
GTGGCAAATT GTTTTCATGG TATTGCAGCA AGATACGGAG GAGAAGAATT TGTTATCGTA
TTACCGGATA TAGGAATATT AGATTTTTAT CATATCGTAA CTTCATTAAA AGAAACAATT
GATACTACAA CCTTATACTT TAATGAGGAT GAAATTAATG TAAAAGTTAG CGTCGGTATT
AGTTCCTATC CTGAAACGAG TTTAAGTTGT CAACAACTTC TAAACCGTGC AGACGGAGCG
ATGTATTATT CCAAGCGAAA CGGTCGTAAC AGCATCACAG TAGACAATGA TATTATACAA
GATTATGTAA GAAAGAATAA GGAAACAAGG GGGGAGTTGT AA
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| Protein sequence | MSDDLLVFRK KFSRGLVLVT SVFWLYTLIQ LVGNLSEHAS FGILVTSGAL IIDILAEHTK
LFKKRIAWMI LRSIELISFS ICFFVTIGSI NSMFFGIELI AVMLQLLMLT DFLDVYSRAI
TLTTMSLPAI IYLISIILLK PERQEEFFGM VCAYLSLIFV VMLISELISE VFIATDKRIF
EIRRFSEQTK ETNEALRNQQ EKFRKVNEEL GIQKIMLEAA YHKINSANTE NQTLYQVIRY
ISTELEIGNL MKLITEAIYE AMGLDVCTII LEPDIAGNKQ VTYEIHSRLG KGFYEQMSNR
IEQGCIEEYM KEEGNYIDNQ VQPGKYSFLK DRKINSLLIV PLVREKKVIG ALLCGHSQFE
YFNGNIIFFE TVVAQLLVAI HNASLYSKMQ QMAIRDSLTG IYNRGQLNVI LEQYTKRASE
QNKSLSVALL DIDLFKKIND TYGHLFGDEV IKMVASKLQE VANCFHGIAA RYGGEEFVIV
LPDIGILDFY HIVTSLKETI DTTTLYFNED EINVKVSVGI SSYPETSLSC QQLLNRADGA
MYYSKRNGRN SITVDNDIIQ DYVRKNKETR GEL
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