Gene Cphy_2690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2690 
Symbol 
ID5742857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3277960 
End bp3280053 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content35% 
IMG OID641293782 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001559790 
Protein GI160880822 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTAA GTCAATATTT AGAGATTTTC ATCGATGAAA CAAAGGAACA TCTTCAAAGT 
TTAAATGAAC AATTGTTGAT TCTTGAAAAA GAACCTGAGA ATGAAGATAC GATAAATGAG
ATATTCCGTT CTGCACATTC CTTAAAAGGA ATGGCTGGAA CAATGGGCTA TAAGAGAATG
CAAAGACTTA CTCATGATAT GGAAAATGTA TTTTCTGAAA TTCGTACAGG TAAAATGAAA
GTAAAGGCTG AACTGGTGGA TGTATTATTC AAAGGTTTGG ATGCACTAGA ATCTTATCTA
GACCGTATTA TTACTTCTGC TGATGAAGGT ACCGAAGACA ATGAGGACAT CATTAAAAGC
TTAAATCGTA TTCTTGAGGA AGGTGTAAAA GCTTTTGCAC AAGATGCTAC TGAGAGTAAA
GAAGAGACTC ATAAATCAGT AGTAAGTGCA GCTGAAGTTT CAAACTTAAA AGAATCAGTA
CAAGCTGATA TTGCTCTTGC AGATCATGAA TTACGTGCTG TTGAAAAGAT GTTAGAAGAG
GGTGGACATG CGTATTCTTT AACAATATAC ATACAAGAGT CCTGTATCTT AAAAGCAGCA
AGAGCGTTTT TAGTATTCAA AGCATTAGAA GAACTAGGTG ACATCATTAA GAGTAAGCCA
GAAGTTCAAG ATATTGAAGA TGAACGCTTT GATCTAGATT TTTCTGTTGT CTTATTAACA
AAAGAATCTA TGAGTAAGGT AGAGAAAGTT GTTTCTAATG TTTCTGAAAT CAATGGTGTT
GATATCTCAG AAATTATAGT TCCAAAGAGT GAACACAAAG AGGAAACATT ACATGAATTA
GAGTCAAAGC AAGAGCAAAA ATCCTTATCA AAGAATTCCT ATAATGCTAA GAGTGCAGCA
GCTACTGCAA AACAAAAAGA AGCTGCAAAA CCAGTTGTGA ACCGTTCTGT TCGTGTTGAT
ATTGAAAAGT TAGATGATTT AATGAACCTT GTGAGTGAGC TTATTATTGC GAAAAATGGT
TTGGTTTCTA TGAATGGCAC GGAAACGAAG TCAGATGCAA TGGGCGGTTT TAATGAGCAG
ATTGAGTACT TAGAAAGAAT TACAACGAAT CTACATCAAT CCGTAATGAA GGTTCGAATG
GTACCGATTG AAAGTGTAGT GAATCGATTC CCACGTATGA TCCGTGACTT ATCCAAAAAA
CTTGATAAGA AAATGGAATT ATACATGACA GGTGAAGATA CAGAATTAGA TCGTACAGTA
ATTGATGAAA TCGGTGATCC ATTAATGCAT CTTCTCCGTA ATGCAGCAGA TCATGGACTT
GAAAGTAATG AAGAGAGAAT GAGTCTTGGG AAACCTGAGA TTGGTTCCAT CTTCTTAGAT
GCTTATCAGG AAGGTAATAA TGTTGTAATA GAAGTCAGGG ATGACGGTTC TGGAATTAAT
GTAGAAAAGA TTAAAAATAA AGCCATCGAT AAGGGTACGA TAACCGAAGA ACAAGCAGCT
GCGATGACAG ACAAAGAAAT TATTGATTTG TTATTCCGTC CAAGTTTTTC AACTGCTGAA
GTTATCTCTG ATGTATCTGG TCGAGGTGTA GGTCTTGATG TTGTAAAAAC AAAGATTGAG
ACGTTAGGTG GAAATATTGA AACCAAGACA ACTCTTTCGA AAGGAAGTAA CTTCATTATT
CGCCTACCTC TAACTCTTGC AATCATTCAG GCATTGATGG TAGAACTAGG AACAGAGAAA
TATGCGATTC CACTTGGTAG CATTGAAACA ATTGAAAATG TAGCAACGAA GGAAATCAAG
TACGTACAGT CCAAAGAAGT AATTCACCTA CGTGGTAATG TAATTCCATT AATACGTCTA
AATAAGATTC TTGATGTGAC AGAAAACCTT AAGGAAACTG AGGATTTAAC AGTTGTTATC
GTTAAGAAGG GTGACAAACT TGCAGGACTT GTCGTAGATA ACTTAATTGG GCAGCTTGAG
ATTGTAATCA AATCAATCGG AAAATATATC AATAACAGCA AGATGATAAG TGGTGCAACC
ATCTTAGGTG ATGGTGAAAT CGCATTAATT CTTGATGTAA ATTCTTTGGT ATAG
 
Protein sequence
MDVSQYLEIF IDETKEHLQS LNEQLLILEK EPENEDTINE IFRSAHSLKG MAGTMGYKRM 
QRLTHDMENV FSEIRTGKMK VKAELVDVLF KGLDALESYL DRIITSADEG TEDNEDIIKS
LNRILEEGVK AFAQDATESK EETHKSVVSA AEVSNLKESV QADIALADHE LRAVEKMLEE
GGHAYSLTIY IQESCILKAA RAFLVFKALE ELGDIIKSKP EVQDIEDERF DLDFSVVLLT
KESMSKVEKV VSNVSEINGV DISEIIVPKS EHKEETLHEL ESKQEQKSLS KNSYNAKSAA
ATAKQKEAAK PVVNRSVRVD IEKLDDLMNL VSELIIAKNG LVSMNGTETK SDAMGGFNEQ
IEYLERITTN LHQSVMKVRM VPIESVVNRF PRMIRDLSKK LDKKMELYMT GEDTELDRTV
IDEIGDPLMH LLRNAADHGL ESNEERMSLG KPEIGSIFLD AYQEGNNVVI EVRDDGSGIN
VEKIKNKAID KGTITEEQAA AMTDKEIIDL LFRPSFSTAE VISDVSGRGV GLDVVKTKIE
TLGGNIETKT TLSKGSNFII RLPLTLAIIQ ALMVELGTEK YAIPLGSIET IENVATKEIK
YVQSKEVIHL RGNVIPLIRL NKILDVTENL KETEDLTVVI VKKGDKLAGL VVDNLIGQLE
IVIKSIGKYI NNSKMISGAT ILGDGEIALI LDVNSLV