| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2507 |
|---|
| Symbol | |
|---|
| ID | 5742578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3080711 |
|---|
| End bp | 3081439 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641293597 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001559607 |
|---|
| Protein GI | 160880639 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.153457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGAC ATTCAAAATT CGCAAACATT AAGCACAAAA AAGAGAAAAA TGATGCTACG
AAAGGAAAAA TCTTCACAAG ACTTGGCCGT GAGATTGCAG TTGCCGTTAA GGAAGGTGGT
CCAGACCCTA ATAATAATAA TAAGTTAAAG GATATTGTTG CAAAAGCGAA AGCAAACAAT
ATGCCAAATG ACACCATCGA CCGTAGCATT AAAAAGGCTG CTGGAGAAGG TAATGCCGTT
AACTATGAAT TTGTAACTTA TGAAGGTTAT GGTCCAAGTG GTACCGCAAT TATTGTAGAA
GCGTTAACTG ATAATAAGAA TCGTACTGCA GCAAATGTAC GTAATGCATT TACAAAAGGT
AATGGTAGCG TAGGAACACA AGGTTGCGTT TCTTATATGT TTGATCAAAA AGGCCAGATT
ATCATCGATA AAGAAGAATG CGATATGGCA TCCGATGATC TTATGATGCT TGCACTTGAT
GCTGGAGCAT CAGATTTTAA TGAAGAAGAT GATAGCTTTG AAGTATTAAC TGAGCCAGAT
GATTTCAGCG TAGTACGTGA AACGTTAGAA AAAGCCGGAG TACCAATGAT GCAAGCAGAA
GTAACTATGA TTCCTCAAAC TTGGGTAGAA CTTTCTGATG AAACGGACTT AAAGAACATA
AATCGTACCT TGGATCTTCT AGATGAGGAT GATGATGTAC AGCAGGTTTA TCATAACTGG
GATGAGTAA
|
|---|
| Protein sequence | MSGHSKFANI KHKKEKNDAT KGKIFTRLGR EIAVAVKEGG PDPNNNNKLK DIVAKAKANN
MPNDTIDRSI KKAAGEGNAV NYEFVTYEGY GPSGTAIIVE ALTDNKNRTA ANVRNAFTKG
NGSVGTQGCV SYMFDQKGQI IIDKEECDMA SDDLMMLALD AGASDFNEED DSFEVLTEPD
DFSVVRETLE KAGVPMMQAE VTMIPQTWVE LSDETDLKNI NRTLDLLDED DDVQQVYHNW
DE
|
|---|
| |