| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2451 |
|---|
| Symbol | |
|---|
| ID | 5742522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3008676 |
|---|
| End bp | 3010016 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641293541 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001559551 |
|---|
| Protein GI | 160880583 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000138411 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTAATG TGGAAGATAG AATCCTAGTT GTTGGCGGTG GTGCTGCTGG TATGATAGCT
GCTATCATGG CTGCAAGAAA AAAGAAAAAA GTTGAGTTAT ATGAGAAGAA TGAAAAGTTA
GGGAAAAAGA TTTATATTAC TGGCAAAGGA AGATGTAATA TAACCAATGC TTCTGACTTA
GAGAATATAT TTGCAAATAT TGTTACGAAC TCAAAATTCA TGTATAGTTC GTTATATTCC
TTTACGAACG AGGATACGAT AAAGTTCTTT GAAGAGCTGG GATTAAAAAC GAAGGTGGAA
CGTGGGAATA GAGTATTTCC TGTTTCGGAT CATTCCTCTG ACGTTATTTC AACTCTTGAG
AGGGAGATGA GAAATCTAGG AGTTAAAATT CACCTCAATA CTGAGGTTAC TTGCTTGCAT
GAGAATGCAG GTAGAGTAAC TGGTATTGCC TTAGCAAATG GAAGTTTTGT AGAGGGCAGT
GCTGTCATTG TTGCTACTGG GGGGTTATCC TATCCATCGA CTGGTTCTAC AGGAGACGGA
TATCGCTTTG CGAAGGAATT TGGGCATGAA ATTACCCCAA GATATCCATC TCTTGTTTCT
ATACATTTGC AAGAAGAGTA TGCAAAAGAG TTGCAGGGGT TATCACTTAA GAATATTGAA
GTAACCGTGA CTGCTGGGGA AGCAAAAGTT TCTGAGACAA AAGTTTCTGT TCCAGAAACT
TCAGAACAAG AACAGGAGAA AAAAGGAAAG AAGAAAAAGA AGATTCCAGA AGGAAAAGAA
CTTTATCGCG CATTTGGTGA GATGTTATTT ACCCATTTTG GTGTCAGCGG TCCCGTAATT
TTAAGTGGTA CAAGCATTTT ACTTCCCTAT CTAAATGAAT GTGAATTGAT TTTTCATCTA
GATTTAAAAC CTGCGCTGTC TTATGAACAA TTAGATGCAA GAATTCTCAG GGATTTTGAG
GAATATAAAA ATAAACAATT TAAAAATTCC TTAGAACATC TATTGCCACA AAAATTAATA
GGCATTATAA TAACACTTAG TGAAATAGCA CCGGACAAAC AGGTGAATGC CATTACCAAG
GAAGAGCGTG CTAGGCTAGT TGACTGTTTA AAGAATATGA CCTTTCATAT TGCTCGCTTT
GGTGGATATA ATGAAGCCGT TGTTACAAAA GGCGGAATTA AAGTGAAAGA AATCGATCCT
ACCACAATGG AATCCAAGCG AATCAATGGT GTTTATTTTG TTGGCGAGGT CCTAGATTTG
GATGCGTTAA CTGGCGGCTA TAATTTACAG ATTGCATGGT CTACTGGCGT AGCGGCCGGA
AGAGCAGTTG CAGAAAATTA G
|
|---|
| Protein sequence | MVNVEDRILV VGGGAAGMIA AIMAARKKKK VELYEKNEKL GKKIYITGKG RCNITNASDL
ENIFANIVTN SKFMYSSLYS FTNEDTIKFF EELGLKTKVE RGNRVFPVSD HSSDVISTLE
REMRNLGVKI HLNTEVTCLH ENAGRVTGIA LANGSFVEGS AVIVATGGLS YPSTGSTGDG
YRFAKEFGHE ITPRYPSLVS IHLQEEYAKE LQGLSLKNIE VTVTAGEAKV SETKVSVPET
SEQEQEKKGK KKKKIPEGKE LYRAFGEMLF THFGVSGPVI LSGTSILLPY LNECELIFHL
DLKPALSYEQ LDARILRDFE EYKNKQFKNS LEHLLPQKLI GIIITLSEIA PDKQVNAITK
EERARLVDCL KNMTFHIARF GGYNEAVVTK GGIKVKEIDP TTMESKRING VYFVGEVLDL
DALTGGYNLQ IAWSTGVAAG RAVAEN
|
|---|
| |