Gene Cphy_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2387 
Symbol 
ID5742457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp2943024 
End bp2943665 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content36% 
IMG OID641293477 
Producthypothetical protein 
Protein accessionYP_001559487 
Protein GI160880519 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000400557 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG CATTAATTAA TGAAAACAGC CAAGCGGCTA AAAACTCAAT AATTTATGAA 
AGTTTAACAA AGGTTGTAGA GCCAATGGGA CATGAAGTAT ACAATTACGG TATGTTCGGT 
GCTGAAGATC CAAATTCCTT AACTTATGTA CAGAATGGTA TCTTAGCAGC AGTATTATTA 
AACTCTAAGG CAGCAGATTA TGTTATTACA GGCTGCGGTA CTGGTGAAGG TGCTATGCTT 
GCATGTAATT CCTTCCCTAA CGTAGTATGT GGTCATGTAG TGGATCCATC CGACGCTTTC 
ATGTTTTCAC AGATTAACGA TGGAAATGCA ATTGCTCTTC CATTTGCAAA GGGATTTGGC 
TGGGGAGCTG AATTAAATCT TCAATATATT TTTGAAAAGT TATTTGATGG AGAAAGTGGA 
CAAGGTTATC CAAAGGAAAG AGCTATCCCA ATGGAGAAAA ATAGAAAGAT ATTAAATGAA 
GTAAAGAAAG TTACTCATGT TGATTTAGTT ACAATCTTAA AGAACTTAGA CCAAGAGTTA 
GTAAAGGGTG CTTTAAGTGG TGCGAAGTTT AAAGAATACT TCTATGCAAA CTGTCAGTGT 
GACAAGATTA GAGCTGCAGT AGCTGAAATC GTAGGGGAAT AA
 
Protein sequence
MKIALINENS QAAKNSIIYE SLTKVVEPMG HEVYNYGMFG AEDPNSLTYV QNGILAAVLL 
NSKAADYVIT GCGTGEGAML ACNSFPNVVC GHVVDPSDAF MFSQINDGNA IALPFAKGFG 
WGAELNLQYI FEKLFDGESG QGYPKERAIP MEKNRKILNE VKKVTHVDLV TILKNLDQEL 
VKGALSGAKF KEYFYANCQC DKIRAAVAEI VGE