| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2259 |
|---|
| Symbol | |
|---|
| ID | 5745319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2784064 |
|---|
| End bp | 2784792 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641293351 |
|---|
| Product | PP-loop domain-containing protein |
|---|
| Protein accession | YP_001559361 |
|---|
| Protein GI | 160880393 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000140384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAACTAC AGCAACTATA TAGTTATACA AGAAAAGCGA TTGATGATTA TCAGATGATT
GAGGATGGGG ATAAAATTGC AATTGGTATC TCTGGAGGAA AAGACAGTCT TACCTTATTA
TACGCACTTG CTGGCCTTAG AAGATTTTAC CCAAAGAAAT TTACCTTAGA AGCAATTACA
GTAAGCTTAG GTTTTGATAA TTTTGATACG AGTAAAATAG CAGCTTTATG TAAAGAACTA
GATGTGAATT ATACCGTTGT AAATACTGAT ATTGCTCCAA TTATCTTTGA AACAAGAAAA
GAGTCCAATC CATGTTCTCT TTGTGCAAAG ATGAGAAAAG GTGCTTTTAA TGATAAGGCA
AAGGAACTTG GTTGTAATAA ATCCGCTTAT GCTCATCACA AGGATGACGT AATTGAAACA
ACGTTAATGT CACTATTATT TGAAGGACGT TATTATACAT TCTCACCTAT TACTTATCTT
GATCGAATGG ATATTACTTT AATTCGACCA CTAATTTATG TGGATGAAGT AGATGTGATT
GGATTTAAAA ATGCTTATAA TCTCTCAGTC TTAAAGAATC CTTGTCCAAT TGATGGCTAT
ACAAAGAGGG AATATGCTAA AAATCTTGTA AAGCAGTTAA ATCAAGAACA CCCAGGTGCT
AGGGTAAGAT TATTTCATGC TGTAACGGAT GGTTTGTTAT CGGATTGGAA GAAAGAAACT
GAACAATAA
|
|---|
| Protein sequence | MKLQQLYSYT RKAIDDYQMI EDGDKIAIGI SGGKDSLTLL YALAGLRRFY PKKFTLEAIT
VSLGFDNFDT SKIAALCKEL DVNYTVVNTD IAPIIFETRK ESNPCSLCAK MRKGAFNDKA
KELGCNKSAY AHHKDDVIET TLMSLLFEGR YYTFSPITYL DRMDITLIRP LIYVDEVDVI
GFKNAYNLSV LKNPCPIDGY TKREYAKNLV KQLNQEHPGA RVRLFHAVTD GLLSDWKKET
EQ
|
|---|
| |