| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2221 |
|---|
| Symbol | |
|---|
| ID | 5744532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2742410 |
|---|
| End bp | 2743444 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641293316 |
|---|
| Product | chloramphenicol/florfenicol resistance protein |
|---|
| Protein accession | YP_001559326 |
|---|
| Protein GI | 160880358 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATT CAAAATATGA AACAATGAAA CAACTTATAG CGGACATGAA GTTACCGGAT
TATCGCTATG AGCAAATTAT AAAAGCAATC TTTTCACAAC ACACTTCAAC TTTTGAAAAG
ATGAGCACAC TACCTTTAGA ATTAAAGAAA TCTTTGATAA ATACCTTCGG GCCATCTGTC
TGCTGCACTG TACCAGTTGC GTGTCAGACC TCAGGACAAG CGGATAAAAT ATTATTTTCA
CTACCGGATG GCAACCGCGT GGAAACAGTA AACCTGCATT ACAAAAAGGG GTGGGAATCT
TTTTGCATCT CGTCTCAATG CGGCTGTGGT TTCGGCTGCC AATTTTGTGC GACTGGAACT
CTTGGCCACA AACGTAATAT GACTGCGGAT GAAATTACAG ATCAACTCCT GTATTTTCAT
CTAAATGGAC ATAAGCTTAA CAGTATTTCC TTTATGGGAA TGGGTGAACC ATTAGCCAAT
CCAAATCTGT TTGACGCCTT GAATATTTTA AACGATTCGT CTCTGTTTGG TTTAAGCCAA
AGGCGTATCA CCATATCAAC GATTGGGATT ATACCAGGTA TCAAACGGTT AACACATGAG
TTTCCTCAAA TCAATTTGGC CTATTCGCTG CACTCCCCTT TTGAAAACCA ACGGAGCGAA
TTGATGCCTG TGAATCGTTC ATTTCCACTC CATGAGGTAA TGAACGCGCT AGACAATCAC
ATTCGACATA CCGGGCGACG ATTGTTCCTT GCTTATATCA TGCTTAATGG AGTAAACGAT
TCGGTGGATC ATGCAAAAGC TTTAGTAGAA CTGTTGCAGG ACCGTGGACC CTGGGCACAT
TTATATCATG TTGATCTAAT TCCATATAAC GCAACAGATA AAACTCCACG AAAATTTGCC
TCATCTGACA AAATTACTAT GAAAAGATTC CGCGATATTT TGCATGCGAA TGGTATTAGT
GTAGCTACAA GAACACAATT TGGTTCAGAC ATCAGTGCTG CATGTGGACA GCTCTTGGGT
GAGAAAGATG TATAG
|
|---|
| Protein sequence | MNYSKYETMK QLIADMKLPD YRYEQIIKAI FSQHTSTFEK MSTLPLELKK SLINTFGPSV
CCTVPVACQT SGQADKILFS LPDGNRVETV NLHYKKGWES FCISSQCGCG FGCQFCATGT
LGHKRNMTAD EITDQLLYFH LNGHKLNSIS FMGMGEPLAN PNLFDALNIL NDSSLFGLSQ
RRITISTIGI IPGIKRLTHE FPQINLAYSL HSPFENQRSE LMPVNRSFPL HEVMNALDNH
IRHTGRRLFL AYIMLNGVND SVDHAKALVE LLQDRGPWAH LYHVDLIPYN ATDKTPRKFA
SSDKITMKRF RDILHANGIS VATRTQFGSD ISAACGQLLG EKDV
|
|---|
| |