| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2182 |
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| Symbol | |
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| ID | 5744493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2693182 |
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| End bp | 2694063 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641293277 |
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| Product | patatin |
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| Protein accession | YP_001559287 |
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| Protein GI | 160880319 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000772751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAC CTAGAATTGG ATTAGTACTT GCAGGAGGAG GTGCTAAGGG CGCATATGAG
GCTGGAGTAT TTAAAACTTT ATGGGAACTT AACCTTATAG ATAATATTAA GGTAATCTCC
GGTACCAGTA TTGGCTCAGT CAATGCACTC CTTTTTGCCA TGAATGATTT TAAAGTAGTT
AAGAATAGTT GGAGTAATTT GTCCTATTCC CGTTTTTTAT TAAATGAAGA AAAGTTTCGA
AAGGAATATG TGCCTATATT AATCAAGCGT GCAAGGCACG GTTATGAAGA GAATCCAATC
GTTCATGACC TGGACACCAG AGACATTGGA TTGATTTCAC AAAAAGGTGT GGAAGACTTT
CTCAAAGAGT ACGTGGATGT GGAGATAATT AAAAGGTCCA AAAGGGATCT CTTTGCATGT
GCTTATAACA TTGATAAAGG AAAGCCAGAG TATTTTCTTT TGAATGAACT AAAGGAAGAA
GAACTGATTG ATGTAGTATT AGCTTCCTGT GCGATCCCAT ATTTATTTCC ACCAAGAAAT
ATCAGGGGAT GTCGTTATGC AGATGGAGGG ATTCATGCTA TAGAGTACCC AAATAATAAT
ATTGATAATG TACCGATTCA TCCACTTCAG GATTATCAAT TGGATTTTGC TTTCGTTGTC
CATTTATCGG ATAAGAAGAA GGAAGAGGGA GTGGAATTCG AAAAACTTAA ACAGGTGAAA
ATGATTCATA TCTATCCATC AAAACCGTTA GAACGGATTG GTGGCACCGG AACTATTCTT
CTTGAACAAA AGAGATTAGA GGAAAATGTG GAACTTGGAT ATCGGGATTC TATGGTTGCG
ATAGCACCTA AGATTTTGGC ATATTGGAAG AAGTATAATT GA
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| Protein sequence | MKEPRIGLVL AGGGAKGAYE AGVFKTLWEL NLIDNIKVIS GTSIGSVNAL LFAMNDFKVV
KNSWSNLSYS RFLLNEEKFR KEYVPILIKR ARHGYEENPI VHDLDTRDIG LISQKGVEDF
LKEYVDVEII KRSKRDLFAC AYNIDKGKPE YFLLNELKEE ELIDVVLASC AIPYLFPPRN
IRGCRYADGG IHAIEYPNNN IDNVPIHPLQ DYQLDFAFVV HLSDKKKEEG VEFEKLKQVK
MIHIYPSKPL ERIGGTGTIL LEQKRLEENV ELGYRDSMVA IAPKILAYWK KYN
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