Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2172 |
Symbol | |
ID | 5744483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2682183 |
End bp | 2683085 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641293267 |
Product | integrase catalytic region |
Protein accession | YP_001559277 |
Protein GI | 160880309 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTCAGC AATTAAATGT TTCACGTACA GGATACTATA AGTGGTTGAA TCGTGAACAG CCAAAAGAAG AGATTGAAAA CGAAAAGATA GCTCTATGGA TCAGGGAATA CGATGAAAAG TTCAAACATA CTTTAGGCTA TCGTAGAATG CGTAATTACA TTAACCGAGA TAAAAACAAG CATTATAGTA AAGGTAGAAT ACAACGTATT ATGCGTGTAT ATGGCATCAA ATCTGTAATT AGAAAGCAGC GAAAACCGTA TCGTTATTCA ACACCAGAAA CAACTGCTGA AAATATTTTA CATAGGGAAT TTGAGGCTTC AAAACCTAAT GAGAAATGGG GAACAGATGT TACAGAATTC AAAGTGCCTA TGAGTAATAG GAAAGTATAT TTAAGTGCCA TTCTAGATTT TTATGATAAG TCAGTAGTGT CATATGTACT AAGCAACCAC AATGATAACA AGCTTGTTTT TGATACATAT GACTTAGCAC TTAAATCTAA TCCAGATGTC ACACCCCTCT TTCATAGTGA TAGAGGATTT CAATATACAA ACAAAGTTTT TCAGAAGAAA CTTTTGAATC AAGGAATGAC TCAATCTATG TCTCGTGTTA GTTGCTGTAT TGATAATGGT CCAACAGAAG GTCTTTGGGG AATTATCAAA TCTGAAATGT ATTATATATC AGATTTCGCT GATGAAAACG AACTTTGTCA GGCAATCGCT GAATATATAG AATACTATAA CAATGGACGA TATCAGGAAC GCTTTAGTAA CTTAGCACCA ATGGAAGTTC GGAAGGCGGC TATCAACTCA GAGTTTCCAG TTAAATATCC AATACCAGAA AACAAAAGAA TTCTTGCTTA TAAAGCAGAA TTAGAAGCAA AGAAAAAGGA ACGAATCGCA TAA
|
Protein sequence | MCQQLNVSRT GYYKWLNREQ PKEEIENEKI ALWIREYDEK FKHTLGYRRM RNYINRDKNK HYSKGRIQRI MRVYGIKSVI RKQRKPYRYS TPETTAENIL HREFEASKPN EKWGTDVTEF KVPMSNRKVY LSAILDFYDK SVVSYVLSNH NDNKLVFDTY DLALKSNPDV TPLFHSDRGF QYTNKVFQKK LLNQGMTQSM SRVSCCIDNG PTEGLWGIIK SEMYYISDFA DENELCQAIA EYIEYYNNGR YQERFSNLAP MEVRKAAINS EFPVKYPIPE NKRILAYKAE LEAKKKERIA
|
| |