| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2156 |
|---|
| Symbol | |
|---|
| ID | 5744162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2665661 |
|---|
| End bp | 2666563 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641293251 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001559261 |
|---|
| Protein GI | 160880293 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATTA GAAATATCAA GACGTTTATT AAGGTAGCGG CAACTCAGAA TTTTTCAAAG
GCAGCAGAAC AACTGGGTTA TTCTCAATCC ACAATTACTA TTCAGATACA GCAATTGGAA
AAGGAATTAG GAACACAACT TTTTGAGAGA ATTGGAAAAC AGGTATCACT AACGGAACAA
GGGGAAGTTT TTCTTAATCA TGCAAATGAA ATTATGAGGG TAACCAATGA AGCTGCAGTA
TTTGCCAGAG AAACGAGTAC TCCAGAAGGT ACGCTTCGTA TCGGGAGTGT GGAATCGCTT
GCGACTGCTA TACTCCCAGA ACTTTTGTTA CGATTTCATA ATGCATGCCC AAAGGTGGAA
ACAATAATAA AAACGGACAT GTCAGATGGT CTAATTAATA TGGTAAGAAA TAATGAGATT
GATTTATTTC TTACTTTAGA TCAAAAAATT TATGGTTCTG AATGGGTTCG AGCTGTACAG
CAAGAGGAAG ATATCATTTT TGTTACCTCG AGCAAGCATT CATTTTCAGG GAAAGAAAAA
ATTAACATTG AGACCCTTCA GAATGAACCA TTCCTCTTGA CTGAAAAAGG GGTAAGTTAT
CGTTATGAGC TAGAAAGGAT ACTATCTGAA AAAGAAATAG TAATCAAGCC TGTGCTTGAG
ATTGGAAATA CAGAGACCAT TATTCATCTG TTAGAGCATG GTATGGGTGT TTCTTTTCTA
CCTATGTTTT CTGTGAGTAA ATCAATTGAA AGAGGTATAT TAACTCAAAT TCAAGCAGAC
TTTCCTGCCG TACATATGTA CAGTCAACTG CTATACCACA AAAATAAGTG GATTACTTCA
CAGATGAATA CTTTTATTAC GATTGCCCAG GAATTTTTTA AAACAGATTA TAAGATGCCG
TGA
|
|---|
| Protein sequence | MEIRNIKTFI KVAATQNFSK AAEQLGYSQS TITIQIQQLE KELGTQLFER IGKQVSLTEQ
GEVFLNHANE IMRVTNEAAV FARETSTPEG TLRIGSVESL ATAILPELLL RFHNACPKVE
TIIKTDMSDG LINMVRNNEI DLFLTLDQKI YGSEWVRAVQ QEEDIIFVTS SKHSFSGKEK
INIETLQNEP FLLTEKGVSY RYELERILSE KEIVIKPVLE IGNTETIIHL LEHGMGVSFL
PMFSVSKSIE RGILTQIQAD FPAVHMYSQL LYHKNKWITS QMNTFITIAQ EFFKTDYKMP
|
|---|
| |