Gene Cphy_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2113 
Symbol 
ID5744119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2612344 
End bp2613255 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content36% 
IMG OID641293208 
ProductABC transporter related 
Protein accessionYP_001559218 
Protein GI160880250 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAGA TGGATATATT AACATTGTCA CATGTAACTA AACGTTTTGG CTCTCATAAA 
GTAATTGATG ACCTGTCATT TTCGGTACCA GAGAATACAA TCTATGGCTT TATTGGAGAA
AATGGTGCTG GAAAAACTAC CACAATGAAG ATGATTCTTG GTCTATACCA GGTAGAGGAT
GGTGTCATAC AGGTAAATGG AGAGAAGGTT ACTTACGGTC AAACAAATAC CAACCGTTTC
ATTGGATATC TTCCAGATGT TCCAGAATTC TACGGGTATA TGACTCCTAC TGAATATCTT
AGGCTATGTG GGGAGATTAC TGGTATCCCA GAGAAGCAAC TAAAGAGTAG AACGAATGAA
TTACTTGAAC TTGTCGGACT TGAAAAAGCA AATAAGAGAA TACAAGGTTT TTCAAGAGGA
ATGAAACAAC GTCTTGGAAT TGCACAGGCA CTCTTAAATA AGCCAAAACT CTTGATTTGT
GATGAGCCTA CCTCCGCACT AGATCCGATT GGTAGAAAAG AAATTATTGA TATCCTGCAG
TCAGTAAAAA ATCAGACTAC AGTTGTCTTC TCCACACATA TTTTATCTGA TGTAGAAAGA
ATTTGTGATG AAATAGGTTT ACTTCATAAT GGTAAACTTG CATTACATGG AAATATGAAT
GATATCCGTA AATTACGAAG AAGAGACGGA TATGAAATAG AATTCTATAG AGAGGAAGAT
GCTAGAAATT TCTCCGAACT CTATGATGGC GGGATACTAA TTAGTAAAAT GCAACTTTTA
TATAAAGAAA GAAACGAAGA GGATATGTTA AAAGCAATGA AGGTTCTTTA TGAGAATAAC
ATCCATCCAC AAAAAATTGA GATGCGGGAA GCGACCTTGG AATCTCTATT TATGGAGGTG
GTTAAAAAAT GA
 
Protein sequence
MHKMDILTLS HVTKRFGSHK VIDDLSFSVP ENTIYGFIGE NGAGKTTTMK MILGLYQVED 
GVIQVNGEKV TYGQTNTNRF IGYLPDVPEF YGYMTPTEYL RLCGEITGIP EKQLKSRTNE
LLELVGLEKA NKRIQGFSRG MKQRLGIAQA LLNKPKLLIC DEPTSALDPI GRKEIIDILQ
SVKNQTTVVF STHILSDVER ICDEIGLLHN GKLALHGNMN DIRKLRRRDG YEIEFYREED
ARNFSELYDG GILISKMQLL YKERNEEDML KAMKVLYENN IHPQKIEMRE ATLESLFMEV
VKK