| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2110 |
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| Symbol | |
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| ID | 5744116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2609432 |
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| End bp | 2610592 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641293205 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_001559215 |
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| Protein GI | 160880247 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCTAT CCGTTCAAAT TGCCTCGAAC ATTGTTAGGG AAGTTAATTC CGTCATTCCA
TTAAAGATTA ATATTATGAA TGAAAAAGGT ATTATCATCG CAAGTTCAGA TCAGCCGCGA
ATTGGCCGTT TTCATGAGGG CGCTATGCAT ATCATTGAAA ATCAAGTCGA TGAAGTCACG
GTACATTATG ATGGAGAGTT TAATGGTGCT CTTCAAGGCA TTAATTATCC GCTCAAATTA
CAAGGATATA TTATAGGGGT TCTTGGGATA ACTGGAAAAT ACGAAGAAAT TGCAAGTAGT
GCATTAATCA TAAAACGTAT GACTGAACTT TTGCTGGAGA ATACCTATTC CGTAGAACAA
AGGCAACTAA AGGAAAATGT CTATACTCGT TATCTTTCAG AGTGGTTAAA TGGTGAAGCG
AAAAATATAA CTACCGACTT TGTAAGACGT GGTAAAGTTC TTGGATTTGA TATTACAATA
CCACGTCGTA TCTTAGTGTG CAGCTTCTAT CATTCTAATC AAGGAGAAAA TTTACAGTCC
ATGCAAGTGA TTGAAGAAGC AGAAAAATAT TTAAAGAAAC GAGTAGCAAG CAAAGATTCA
TTAAATCTAT ATTATAAGGC GGGTTCTACA CTTGTTTGTG CGGTAACTTC TACTACTGAT
ATGAGCGTTG TATCCTTAGC GAATGAATTA AAAAAACAGG TGGAAGAAAA ATTTTCAGTA
AGGTTAGTAA TAGGTATTGA TAGTAGTGTT GAGAATTTTG CTTTTGCTCA GACCGCACTA
ATTCGTGCTC AAAAAGCAAA TAAGGCATGT ATGCGAACTC AAAAGCGGGA TATTCAGCTT
TATGATGATT TAAATATGGA GGTTTTTACA GACGAAATAA GCGAGTTATC GAAACAAGAA
TTTGTGCATC GTATCTTTAA AGGATTTAAC AATGAAGAAA TTCGTAATTC TATGGTATTG
CTAGAGACGT TTTATGATAT GGAAGGTTCC ATTCAAAAGG TATCGGAACA TTTATTTATT
CATAAAAATA CTTTACAAAA TAAATTGAAA CGAATTGCAG AACGAACAGG ATATGATCCA
AGGTCGATTC GTCACTCTTC TCTTTTTTAC ATAGCGATTT ATTTTTATAG GGATATCTAT
AATAGTATGC AAGATATATA A
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| Protein sequence | MILSVQIASN IVREVNSVIP LKINIMNEKG IIIASSDQPR IGRFHEGAMH IIENQVDEVT
VHYDGEFNGA LQGINYPLKL QGYIIGVLGI TGKYEEIASS ALIIKRMTEL LLENTYSVEQ
RQLKENVYTR YLSEWLNGEA KNITTDFVRR GKVLGFDITI PRRILVCSFY HSNQGENLQS
MQVIEEAEKY LKKRVASKDS LNLYYKAGST LVCAVTSTTD MSVVSLANEL KKQVEEKFSV
RLVIGIDSSV ENFAFAQTAL IRAQKANKAC MRTQKRDIQL YDDLNMEVFT DEISELSKQE
FVHRIFKGFN NEEIRNSMVL LETFYDMEGS IQKVSEHLFI HKNTLQNKLK RIAERTGYDP
RSIRHSSLFY IAIYFYRDIY NSMQDI
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