| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2052 |
|---|
| Symbol | |
|---|
| ID | 5743752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2532924 |
|---|
| End bp | 2534393 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641293149 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001559159 |
|---|
| Protein GI | 160880191 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0827498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA ATTTTCTTTC CTATTCCAAA AAGCAACTTG GTAATGGATT AAAAAATATC
TATTCTAATA AGGTTGTTCT TATGTTTCTT ATACTTTGTA TATTCGGTAT AGCAACGACT
GGAAAACCAT TAATTTTTAC GGTTTCGGAG GTATTTACGA GATTCGGAAG AAATACCTTT
TTAGTTATAG CACTAATCAT CCCAGTACTA GCTGGGTTAG GGTTAAACTT TGGTATCGTA
GTTGGTGCCA TGGCTGCTCA GATTTCTATT TTCTTTGTCG TATATTGGGG TTTCACTGGA
ATTACCGGAT TGATTCTATG TGTCTTATTA AGTACACCAA TCGCCATTTT ATTTGGATTC
CTTGTTGGAT GGCTCTACAA TAAAACAAAA GGTGCTGAAA TGATTTCCGG TATGGTACTC
GCCTACTTTG CGGATGGGTT ATATCAACTA TTTTTCCTTT TCATTCTTGG AGGTATTATT
CCAATCAAGG ATACTACATT AATGATTGCA GGTGGAATTG GTGTTAAAAA TACCATAGAT
TTAACGGGAA ATCTAAAGTA TGCCTTAGAT ACCGTTAGCA TGTTACTTTT ACTTCGGATT
CTTCTAGTCC TGTATTTTGT TTTTAGTGCT GCTAATGTAA TCCTACGAAA AAAGAAGGAG
GGTAAATCAG GCTATAAATT ATCTATCATT AAAATAAGTG TCACGATTCT TCTACTCCTT
TTAACATTGA TACCAGCTAT CCGTGATTTT CTAGGAACTG ACCGTCTGTT GTTATTAAAT
GCGATTACCA TTGGCTGTGT GTTAGCTATC CTTTATGTTA TTACAAAGAT TTGTTCGATT
AAGTTAATTC AAAAACATAA AGAACTTGAA GTAAACAAAT ACCTAGCAAT GATAATTATA
GCTATCATTG TATATGCACT AACCTATATT CCTGTAGTTT TTGATATTAC AATGAGTATT
TCTCTACCAG TATGTACTTA TGCGGCAATT ATTTTGATTT GTGGTTTCAA TCGCTGGCTT
TTAAGTACAA AGCTTGGCCA GAATATGCGT ACTGTCGGTC AGAGCAGAAC TGTTGCTAAC
TCGGCAGGAA TTAATGTAAA TAAAACACGT ATTATTGCGA TGTGCATTTC TACTGTTTTA
GCTAGCTGGG GACAATTAAT TTACCTTCAA AATCTTGGAA CCTTTTCCAC CTATGGAGCT
CATTCTATGG TTGGTCTATA TGCTATAGCT GCATTACTTG TAGGCGGAGC AGGTGTTCAA
ATGGCGAACA ATAAACAAGC AATCCTTGGT GTTATCCTAT TTCATACCCT ATTTGTTGTT
GCACCACTTT CAGCAAGTAA TTTATTAGGT AGTTCTTTGA TTGGTGAGTA TTTCCGTGTA
TTTATATGCT ATGGAGTTAT TGCTCTTTCT CTTGCATTGC ATGCTTGGAA AACTATAAAG
AAACCTGCGA AGCAGAAAGA ATTAAAGTAA
|
|---|
| Protein sequence | MKNNFLSYSK KQLGNGLKNI YSNKVVLMFL ILCIFGIATT GKPLIFTVSE VFTRFGRNTF
LVIALIIPVL AGLGLNFGIV VGAMAAQISI FFVVYWGFTG ITGLILCVLL STPIAILFGF
LVGWLYNKTK GAEMISGMVL AYFADGLYQL FFLFILGGII PIKDTTLMIA GGIGVKNTID
LTGNLKYALD TVSMLLLLRI LLVLYFVFSA ANVILRKKKE GKSGYKLSII KISVTILLLL
LTLIPAIRDF LGTDRLLLLN AITIGCVLAI LYVITKICSI KLIQKHKELE VNKYLAMIII
AIIVYALTYI PVVFDITMSI SLPVCTYAAI ILICGFNRWL LSTKLGQNMR TVGQSRTVAN
SAGINVNKTR IIAMCISTVL ASWGQLIYLQ NLGTFSTYGA HSMVGLYAIA ALLVGGAGVQ
MANNKQAILG VILFHTLFVV APLSASNLLG SSLIGEYFRV FICYGVIALS LALHAWKTIK
KPAKQKELK
|
|---|
| |