| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1968 |
|---|
| Symbol | |
|---|
| ID | 5744648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2429017 |
|---|
| End bp | 2430558 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641293065 |
|---|
| Product | von Willebrand factor type A |
|---|
| Protein accession | YP_001559075 |
|---|
| Protein GI | 160880107 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00234323 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTACAAAA AAATAGCTGT TGTCCTTTTG CTGGCAGCTT TATTATTTTC TCTAAGCTCA
TGTTCTTTTG AGAATAAGAG AGAAGGAGAC AATTCATTCA CTGTTTTGTC AAGCAGCGAA
AATAAGGATT TAGAGCAAAT GCTCATGGAA TTTGCAGAAA AAAATAAAAT TAATTTAAAG
TTTGAGTACA CAGGGTCTTT AAATATTCCT TCTATGATAA AATCATCGCA AAAGGATTAT
GATGCCGTAT GGTCCTCAAA CAGCATATGG AATGCTTCTA TCTCAAGTTC TGTTTTAAAA
AATTCTAAGT CCATATCTGT TAATCCCGTA ATATTTGCAG TGAAAGAAAG TAGATATAAA
AACTTGGGAT TTAGTAAAGA CACGGTTGTA AACGATCTGG TGCAGGCCGT TGAAAAAGGA
AATCTAAAGT TTCTAATGCC TTCGGTTACT CAAACAAACA GCGGAGCATC AGCTTACATA
GGATTTTTAA ACTGTCTGGC AGGTAATCCT CCAGTTTTAA CAGAGGAAGA CTTGAATTCA
GAGGCTCTAC AAGAAAGCTT AAAGACCTTG TTTAAAGGAG TGGTCAGAAA CTCCGGTAGT
GATGAATACT TAATAGACAT CTTCAATGAA GGTGGCTACG ATGCACTTGT AAACTATGAA
TCTTCGCTAA TAGAACTGAA CAATCAGTTA ATAAAAAGTA ATAAAGAACC TTTAAGATTC
ATTTATCCTT CCGACGGAGT TTCCGTTTCG GACAGCCCCT TTGCGTACAT AGACAACAAT
AATGAGAAAA AACTGGAAAT ATTTAACAAG CTACAAAGCT TCTTATTGTC TTCGGATACC
CAGCAAAAGC TTGAAAGCAT GGGTAGAAGA ACCACTTATG GTGGTCTGGT ATCAAATGAT
GAGGTTTTTA AGGAATCTTA TGGAATTGAT AAGAATGCTT ATTTGTCTCC TATTAAATAC
CCAGCAAGCT CTGTAATTAA AAATGCACTG AATCTTTACC AGGATTTGTT CAGAAAACCC
TCAGTGGTTG TTTTTTGCCT TGATTATTCA GGCAGCATGT TTGGGGAAGG AAATGAACAG
CTTGTTGCGG CAATGGAAAA GATATTGGAT CATAAACTGG CATCGGAGGA TATGATACAG
TTTTCGAAAA TGGATAAAAT ATTTGTTATT CCGTTTTCAA GTGAACTCAA ATGGGTGGAT
TCAGCTATAT CCGGAATAGA TACAGCTAAC CTAATTTCCA GGATAAAGGA TACGGAGGCA
CATGGAAAAA CGAATATATA CGCGCCTGTT GAGCATGCCA TTGAAATATT AAAGGATTTT
GATGCTGATG TATATACAAA ATCCATTGTT TTAATGACAG ACGGTGAATC AGCCGGTAAT
TTCCGTAAAG GTACATCCTA CGATATACCT GTGTTTTCAA TTATGTTCGG AGAAGCAAAT
CCGAAGCAAC TGGATGAAAT TAGCCGACTT ACAAAAGGCA AGACCTTTGA CGGCAGAATA
GGCCTTATTA ATGCTTTTAA GGAAATAAGA GGATATAATT AG
|
|---|
| Protein sequence | MYKKIAVVLL LAALLFSLSS CSFENKREGD NSFTVLSSSE NKDLEQMLME FAEKNKINLK
FEYTGSLNIP SMIKSSQKDY DAVWSSNSIW NASISSSVLK NSKSISVNPV IFAVKESRYK
NLGFSKDTVV NDLVQAVEKG NLKFLMPSVT QTNSGASAYI GFLNCLAGNP PVLTEEDLNS
EALQESLKTL FKGVVRNSGS DEYLIDIFNE GGYDALVNYE SSLIELNNQL IKSNKEPLRF
IYPSDGVSVS DSPFAYIDNN NEKKLEIFNK LQSFLLSSDT QQKLESMGRR TTYGGLVSND
EVFKESYGID KNAYLSPIKY PASSVIKNAL NLYQDLFRKP SVVVFCLDYS GSMFGEGNEQ
LVAAMEKILD HKLASEDMIQ FSKMDKIFVI PFSSELKWVD SAISGIDTAN LISRIKDTEA
HGKTNIYAPV EHAIEILKDF DADVYTKSIV LMTDGESAGN FRKGTSYDIP VFSIMFGEAN
PKQLDEISRL TKGKTFDGRI GLINAFKEIR GYN
|
|---|
| |