Gene Cphy_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1967 
Symbol 
ID5744647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2427815 
End bp2428621 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content38% 
IMG OID641293064 
ProductXRE family transcriptional regulator 
Protein accessionYP_001559074 
Protein GI160880106 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000016802 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGG GAGAAAAAAT TGTAATGTTT CGTACAGAGC ATCACTTATC TCAAGGCGAT 
CTTGCAGAGA AGTTAGGTGT TTCTCGACAG TCTATTTCAA AATGGGAAAC TGGTGGTAGC
GTTCCTGATT TAGATAAACT TATCGCTTTA AGCGAGTTGT TTGATGTTTC TCTTGATAAT
CTCGTTAAGG ATCAAGAGCC AAAGATAAAT ACAGAGTCTA AATCGTCAGA ATCCTCAGAA
TCCTCGGAAT CAGTATCGAA GTATCCGACA CGAAAAGTTG TTGGATGGAT TTTACTGGGT
GTAGGTTTAC AATGCATGGT TTTGGGGCTT TTCCTAAATA TTTTGTTGGC AGTTTTGGGA
GGTTACCTGA TATTGTGTGG TATTATCTGC CAGGCTATTC AAAAGCATCC AGGACTTGTG
ATTGGTTGGG GAACCTTTTT GCCTTGTGCG TACTTTCTTC CAAGGATAAC CAGTGCAAAT
ATGATAATGA TCTTTCTGTC CTATGCCTAT CGAGGCGGAT GGACGATACA ACTGATTATT
TCCTATGCCT TTTGGACTAT GCTATTCCTG CTGATTTTTA CAACAGTTAG AAAAACGAGA
ATGAAAAACT ACCCATTCCT GTTCTGTGGC TGGGCAATCT TTTTTCAAGT ATATGGTTTC
ATACCTATCG CGTTTCGCTA TACAGGGAAA ATTGAGAAAT TTTACATTGC ATTTTCTTGG
TGCGTGATTT TATTTCTTAT TGTACTTCTA TTTTTCACAG GAAAATGCAT TTACAGTTAT
TCTAGAATAG CCAAGGAAAG AAATTGA
 
Protein sequence
MKLGEKIVMF RTEHHLSQGD LAEKLGVSRQ SISKWETGGS VPDLDKLIAL SELFDVSLDN 
LVKDQEPKIN TESKSSESSE SSESVSKYPT RKVVGWILLG VGLQCMVLGL FLNILLAVLG
GYLILCGIIC QAIQKHPGLV IGWGTFLPCA YFLPRITSAN MIMIFLSYAY RGGWTIQLII
SYAFWTMLFL LIFTTVRKTR MKNYPFLFCG WAIFFQVYGF IPIAFRYTGK IEKFYIAFSW
CVILFLIVLL FFTGKCIYSY SRIAKERN