Gene Cphy_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1959 
Symbol 
ID5744638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2419168 
End bp2420232 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content32% 
IMG OID641293055 
Producthypothetical protein 
Protein accessionYP_001559066 
Protein GI160880098 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000013815 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCAAAAA AATATGTAAA ATATCTTTTG AACACTGGAT TTTTATTCGC TGTTTTTCTT 
TTGACTTATT ATCTAGTATT CAAAGATCAT GAACTAAACG CTGTATTAGA TTCCATCCAT
CGGGCTAAGA ATGGATATAT AGTATTGGGA ATGATCTTAA GCTTATTGTT TGTAAGTTCA
GAATCCGTTA TTATTCAATA CCTGATGCAT ACGGTAAAAG AAAAGGTATC GTTTTTACAC
TGTTTAAAGT ACTCTTTTGT AGGATTCTTT TTTAGTGCCA TTACACCTTC CGCTTCTGGC
GGGCAGCCGA TGCAAGTAAT TTCCATGAGC CGTGATGGTA TTAATATGGC AGTATCTACT
GTAGTGCTTA TGATTGTGAC TGCTGCATAT AAAACAGTAT TAATTATTTT ATGTCTGATT
GCAGCAATTT TTGAATGGAG TTTTATTTCG ATTCATGCTT CGAATATTTG GTTTTTAATA
TTGTTTGGGA TTATTGCAAA TGTAGGTTTT GTCTTGTTCT TAGTAATTGC AATATTCAAA
CAATCTTTTG TAACTAAAAT AGTAGGTAGA ACCATTTTAT GGCTTGGGAA CCATAAACTT
ATTAAAAATA AAGAGAAATG GTTAAGAAAA GCATTAAAAA CGTTGAAAAA GTACGATAAG
AGTGCAGATT ATATTAAAGG AAACAAAAAG GTTTTGTTTC ATGTTTTTAT TATTACAATA
TTACAAAGAA TTTGTCTTTT TTCGGTTACT TATATAATTT ATTTAGCATT TGGTCTTCGC
GGTGCGAGTG CATTTCAGAT TATTGCATTA CAGACTATAA TAGCTCTTGC GGTTGATTCA
TTACCACTTC CTGGTGGGAT GGGAGCTAGT GAGAGTAGCT TTTTAGTAAT ATTTTTGACT
ATCTTCGGAG AAGAATTCGT TTTGCCTGGA ATGTTATTAA GCCGAGGTAT TACTTACTAC
GCTTTACTTA TAATTAGCGC AGTTGTTACT GCATTTGGTT CCATAAAGCA AAAACGGAAG
AAAAATTTAG AGAATGGTGG ACAGCTATAT GATAGGATTT TATAA
 
Protein sequence
MPKKYVKYLL NTGFLFAVFL LTYYLVFKDH ELNAVLDSIH RAKNGYIVLG MILSLLFVSS 
ESVIIQYLMH TVKEKVSFLH CLKYSFVGFF FSAITPSASG GQPMQVISMS RDGINMAVST
VVLMIVTAAY KTVLIILCLI AAIFEWSFIS IHASNIWFLI LFGIIANVGF VLFLVIAIFK
QSFVTKIVGR TILWLGNHKL IKNKEKWLRK ALKTLKKYDK SADYIKGNKK VLFHVFIITI
LQRICLFSVT YIIYLAFGLR GASAFQIIAL QTIIALAVDS LPLPGGMGAS ESSFLVIFLT
IFGEEFVLPG MLLSRGITYY ALLIISAVVT AFGSIKQKRK KNLENGGQLY DRIL