Gene Cphy_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1943 
Symbol 
ID5744622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2400010 
End bp2401404 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content37% 
IMG OID641293039 
Productchitinase 
Protein accessionYP_001559050 
Protein GI160880082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0117537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA AATTGCAACG AATTCTTTGT TTTTCTCTGT TACTGTTTAT CATTTTTCCT 
TCAATCTCTA TTTATGCGGC AGATAAAACA CCTTTGTATA ATTCTATAGC ACTCAGTGAA
AAAACTGAGC CGCCATATCC TTTTTGGAAA GATTACATGA ATTATTCACA AAGTGGTACA
AAAGTATATT ACATAGGTAA AATTTATCAA AATAAATGGT ATGCTAATGC TGGACAAAAG
CCAAATGCCG GTGACCCTTG GGCTTTAGTA GGTGATGCAG AATGGACCGT TCCTGAGGAC
GAAAAGAATT ATCAAAAACA AGAAAGTTCA GTTTCAATAA ACAAAATATT GACGGATTCT
GAAATTCTTT CCTTATATGG GGGTATCAAC CCAGAGTATT CACCTGAAAA GGCACTTAAC
AGACTAAACC AACTTATACA AGAGACAGCT TATAATGAGC TTTTCCCATA CCGCTTCGGC
TCTCCATTAT GGAAAACTTG TTCTGCAACT GCACAGTACT ATCCTAACAC CTCTAATATT
CCAGATTATT ATTCTTACAA TAATCTAAAG GAAGCCTTAA AAACTTTGGC AAATACCATT
GTTAAGGTTC AATGGTATGA AGGATCCGAA TGGTGTTACC GTATTATTCG TTTGGATAAG
ACTACAAAAG AACAAAAGCT TACTTATTCC GATCCTAATT TTGATGCTGA ATGGCTTCAA
TCAAAGCCTC TTCAAACTAA AATATGTGAC TATGGCTCCT TTCTGGCTGT AGGTAATAAC
AATACTCAAA AAAGAGAGTT GGCAGGATTT TTAGCGAATA TCTCTCATGA AACCGGTGGC
GGTACGATCG GTGGTGAAGT GTCAAATGAT TCTTTGACCG GACTCTACTT TAATGAAGAG
GTAGGTTTTA TTGGTTCAAC TGCTATCGGT TATGTGCAAA GCACCGGAAC TAATTACCTC
CCAGTAGCCG GAAAGAGTTA TCATGGCAGA GGACCAATTC AATTATCTTA TAATTATAAC
TATGGTCTTT GCTCTGATGT TATTTTAGGA GATAGCTCAA TACTTCTAAA AAACCCTGAG
TTACTTACAA GTAATGGTGT AATGGGCTTT ATGACCGGTA TATGGTTCTG GATGACACCA
CAACCTCCAA AACCTTCTTG CCACGAAGTA ATCAGTGGAA TCTGGCAACC GAAACCAGGT
AGTCCAAATG CTCAATATAA CGGTAATTTT GGATTAACCA TTGTTATAAT CAACAATGAG
TCAGGACAGT CAGAAAACGG AACTGGAGCA GTTGCTCGCC GAGCAAGATA TTATAGAATT
TTTACTCAGA AGATGAATGC TAATATTCAA GGAGAGCAAT GTGATACGGT TGGCATGACA
ACCTTTGTAC AATAA
 
Protein sequence
MKLKLQRILC FSLLLFIIFP SISIYAADKT PLYNSIALSE KTEPPYPFWK DYMNYSQSGT 
KVYYIGKIYQ NKWYANAGQK PNAGDPWALV GDAEWTVPED EKNYQKQESS VSINKILTDS
EILSLYGGIN PEYSPEKALN RLNQLIQETA YNELFPYRFG SPLWKTCSAT AQYYPNTSNI
PDYYSYNNLK EALKTLANTI VKVQWYEGSE WCYRIIRLDK TTKEQKLTYS DPNFDAEWLQ
SKPLQTKICD YGSFLAVGNN NTQKRELAGF LANISHETGG GTIGGEVSND SLTGLYFNEE
VGFIGSTAIG YVQSTGTNYL PVAGKSYHGR GPIQLSYNYN YGLCSDVILG DSSILLKNPE
LLTSNGVMGF MTGIWFWMTP QPPKPSCHEV ISGIWQPKPG SPNAQYNGNF GLTIVIINNE
SGQSENGTGA VARRARYYRI FTQKMNANIQ GEQCDTVGMT TFVQ