| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1930 |
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| Symbol | |
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| ID | 5744609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2385034 |
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| End bp | 2385786 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641293026 |
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| Product | toxin secretion/phage lysis holin |
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| Protein accession | YP_001559037 |
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| Protein GI | 160880069 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4824] Phage-related holin (Lysis protein) |
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| TIGRFAM ID | [TIGR01593] toxin secretion/phage lysis holin |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0311958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGATA TCGTAACATC AATTCAGATA TTAATATCTA GTCTTGGTGG TTTCTTAGGA
TGGTTTTTAG GTGGGACTGA TGGTTTTATG TATGCATTGT TATTGTTTAT CGTTATTGAC
TATCTTACAG GTGTTATGGT TGCTATCTTG CAGCATAAGG TATCAAGTGA GGTTGGGTTT
CGGGGCATTT TTAAAAAGGT AGTTATCTTA TGTCTTGTTG GAATAGGCCA CATTATTGAT
ACGAATGTTG TTCGTAGTGG TAATGTAATG CGAACTGCAA TTATTTTTTT CTATTTATCA
AATGAGGGAA TCAGCATTTT AGAGAATGTT GCAACGATTG GACTGCCTAT ACCAAAAAAA
TTATTGGATG TCCTTGTAGC GTTAAAATCA GAAAATAGTA ATGGAAGCTT GGATATAAAA
AAATTAGAGG AAACATTAGA AAGTGGTAAT AGTGAAGAAT GTAAGGAAAG TAAAAAAGAA
AATATAGGGG AGAGTAAAGA AGATAGATTA GAAGAGAGTA AAGAAGATAA ATTAGAGGAG
GATAAAGAAG ATAAATTAGA CGAGAGTAAA GACGATAAAT TAGAGGAGAG CCAAAAAGAT
ACCTTAGAGA AAAGTAGAGA TACTAACTTA GAGGAAGATA AAAATGATGA TTCTGTGGAA
AGTAAAGAGG ATAGCACGTA TAAAAATAAA AAGGATAACA TGGAGGAAAG CCAAAAAAAG
AACAGTGTAG TAATCCAAAA AAGAAAAATG TGA
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| Protein sequence | MKDIVTSIQI LISSLGGFLG WFLGGTDGFM YALLLFIVID YLTGVMVAIL QHKVSSEVGF
RGIFKKVVIL CLVGIGHIID TNVVRSGNVM RTAIIFFYLS NEGISILENV ATIGLPIPKK
LLDVLVALKS ENSNGSLDIK KLEETLESGN SEECKESKKE NIGESKEDRL EESKEDKLEE
DKEDKLDESK DDKLEESQKD TLEKSRDTNL EEDKNDDSVE SKEDSTYKNK KDNMEESQKK
NSVVIQKRKM
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