Gene Cphy_1910 details

Gene Information

• Locus tag: Cphy_1910
• ID: 5744589
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 2356046
• End bp: 2356669
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641293007
• Product: TetR family transcriptional regulator
• Protein accession: YP_001559018
• Protein GI: 160880050
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0010144
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAGAG TAACGGAAAA TAAACAAGCA AAACGAAATT CAATCTTTCA TTCTTCGTTT 
GATTTGTTTC GGACCAAAGG TTTTTTTCAG ACATCGATCT CGGATATCGT GACAAAGGCT 
GGAGTTGCCA AAGGTACCTT TTATCTATAT TTTAAGGACA AGTATGATTT ACGAGACAAG 
CTTATTGCAT TTAAAGCAGG AACTTTGTTT CATGCAGCTG AACTTAACTT AAGTGAAACA 
AATATTAAGG ATTTTCCGGA ACGACTGATA TTTATTGCAG ATCAGATTAT TGATCGGTTG 
GCTATGGAAC CTGATTTTCT AAAATTTATA TCAAAAAATT TAAGCTGGGG CGTATTTAAG 
ACTGCATTGT TAAAGGGACA TGAAACCGGA GAAACAGATT TTTATAATGC GTATTTGCAT 
ATGGTAGAGG AAAGTCCTTA TGAATTTAAG AATCCCGAAA TTATGTTATT TATGATTGTT 
GAATTAGTAG GTTCAAGCTG TTATAGTTGT ATTCTTGATG ATGAACCATT AACGATGGAA 
GACTATAAGC CATATCTTTA CGAGGTAATT CGAGGAATCA TTCAGATGCA GATAGTTAAA 
AAAAAATCTA GCAATGAGGT TTAA 

 

Protein sequence

MGRVTENKQA KRNSIFHSSF DLFRTKGFFQ TSISDIVTKA GVAKGTFYLY FKDKYDLRDK 
LIAFKAGTLF HAAELNLSET NIKDFPERLI FIADQIIDRL AMEPDFLKFI SKNLSWGVFK 
TALLKGHETG ETDFYNAYLH MVEESPYEFK NPEIMLFMIV ELVGSSCYSC ILDDEPLTME 
DYKPYLYEVI RGIIQMQIVK KKSSNEV