Gene Cphy_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1907 
Symbol 
ID5744586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2350016 
End bp2351425 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content34% 
IMG OID641293004 
Productmajor facilitator transporter 
Protein accessionYP_001559015 
Protein GI160880047 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000193036 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACT TGATGGTAAT GTCAAAATTC CTGCTTGGTA AATTACGAAG GATTTATTTT 
ATGGCTTTGC CAGAAAATAA GCAGGACTTA AAGAGGAGCA GAAGGTGGTA TACGGTAGGA
GATTCTGCAA ATCAAACGAT TGCACAGCTT GCTGGTGGTA CATTTATTGT AACGTTGATG
TCGTATGTTG GAATTTCCGA CGCTAATATA GGTATTCTAA CATCACTTGC CAGCTTAGCA
GCAGTGTTTC AGCTGATGAC GATGCGATTT GTTAATAAGC TACCAAAATA TAAGTTTTAT
GTTTGCTTTA CAGTACTTCA AAAATTAGTT TTTTCACTTA TTTACTTTAT TCCTCTTTTT
ACGTTAAGCA ATCGGGCAAA GATGATTTGG GTTGTATTAG GATATTTCTA TGCGCAGATT
TGTACCCAGA TAGGAACACC AGCGAGTCAA GATTGGATAG CAAGTCTTGT ACCAAGTCGA
TTACGAGGAC GGTATTTTGC AATAAAAGAT TCGGTTGCTG TGTTTATAGT AGCATCAGTT
ATGTTAATTG CAGGAATTAT TCTTGATTAT TTTAAAAATG GTCATTTAAC CACTGGATTT
GTATTGATTG GAATTATGAT AGCAATATTA GTTATCATAA ACCTTGTAGC ATTTAGCTTT
ATGAAAGAGC CAAGGCTATC TCTAACGAAT GAAGATGGGT ACGAGATGCA TGGTACTTTA
GCAAAGCGGG CAAAAACATT ACATAAAAAT GATTTTAATG ATAGTATGAT GTCGGAATTA
AAATTTGCGT TTGGAAATCG TTACTTTCGC AAAGCATTAG GTTTAAATTG TTTATGGATG
ACTTCTTTTT ACATAGCTGC ACCGTTTAAC TCCAGTTACC AGATTAAAGA ATTAACACTA
CCATATACTT TCATTATGAT AATAGGATTT TGTTCGAATC TATTTCGAAT CTATATTTCA
CCAAAAGTTG GACGCCTTGC AGATCGATTT GGTATGGCAA AAGTATTTAA ATATTCCCTG
CTTGGTTTAT TGTTAAATTA CTTTTTGACA GCTTGTTCGC TTCCTAACAA TGCCTATATT
ATGATACCGA TAGCTGCATT TTTCTCTGCT TGTGGGTGGT CCTTTATTGG TATTGGATTA
TTTGGAATCC AACTTGAATT CTTGGATGAA AAGAAACGAA TGATTCAGCT AAGTCTGATA
TCCTCGATTT CTGGAGTTTA TGGTTTTCTC ATATCTTACC TAGGTGGAAG ATTATTAGAT
TATTTACAGA GGAATCCTCT TATCATATTC CAGAGGGAGT TATATGCACA ACAAATTTTA
AATTCAATTG GTGTTGTATT ATTACTTGTT ACCTTTAGTT ATACAAAGCT TTTGATACAA
GGGAAATCAC CGAAAAAACA GGGACGGTAA
 
Protein sequence
MNNLMVMSKF LLGKLRRIYF MALPENKQDL KRSRRWYTVG DSANQTIAQL AGGTFIVTLM 
SYVGISDANI GILTSLASLA AVFQLMTMRF VNKLPKYKFY VCFTVLQKLV FSLIYFIPLF
TLSNRAKMIW VVLGYFYAQI CTQIGTPASQ DWIASLVPSR LRGRYFAIKD SVAVFIVASV
MLIAGIILDY FKNGHLTTGF VLIGIMIAIL VIINLVAFSF MKEPRLSLTN EDGYEMHGTL
AKRAKTLHKN DFNDSMMSEL KFAFGNRYFR KALGLNCLWM TSFYIAAPFN SSYQIKELTL
PYTFIMIIGF CSNLFRIYIS PKVGRLADRF GMAKVFKYSL LGLLLNYFLT ACSLPNNAYI
MIPIAAFFSA CGWSFIGIGL FGIQLEFLDE KKRMIQLSLI SSISGVYGFL ISYLGGRLLD
YLQRNPLIIF QRELYAQQIL NSIGVVLLLV TFSYTKLLIQ GKSPKKQGR